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scn_reactorb_scaffold_118505_2

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 717..1247

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 165.0
  • Bit_score: 189
  • Evalue 3.60e-45
aroK; shikimate kinase (EC:2.7.1.71) similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 161.0
  • Bit_score: 174
  • Evalue 1.40e-41
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCL9_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 163.0
  • Bit_score: 176
  • Evalue 2.30e-41

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Taxonomy

Clostridium tetanomorphum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 531
ATGGTTAAAAATATTGTTTTAATAGGAATGCCTGGCAGTGGCAAATCAACTGTAGGCTATAAGCTTTCAAAAAAATTAGATATGAATTTCATTGATACTGACAGCTATACAGAAGAGGTTGAAAATACCAGTATTAAAAGTATGTTTGAAGTAAGCGAGGAATATTTTAGGAAGATAGAAAGCAAATATATCGAGAAATTAAGCAAGTTAAATGCCGCTGTAATAGCAACAGGCGGCGGAGTAATTAAGAATGAAAATAATATCTTGCTTTTAAAAAACAATTCGATTATCATATACTTAAATCGTAAGGTTGATGATATAATGAAAGACATTGATATCAGCAGCAGACCTTTGCTAAAAGACGGCAAGGACAAATTGAACGAGCTGTTCAGGGAAAGACATCATCTATATCAAAAATATTGTGACATAGAGATTTTGAATGACAGCAGCATACCTGATGTGGTAGATAAAATTTGTGATTTAATAAAAATCTATATCAAAGTAGGTAAAAGCATATGAAAATTTATGTAA
PROTEIN sequence
Length: 177
MVKNIVLIGMPGSGKSTVGYKLSKKLDMNFIDTDSYTEEVENTSIKSMFEVSEEYFRKIESKYIEKLSKLNAAVIATGGGVIKNENNILLLKNNSIIIYLNRKVDDIMKDIDISSRPLLKDGKDKLNELFRERHHLYQKYCDIEILNDSSIPDVVDKICDLIKIYIKVGKSI*KFM*