ggKbase home page

RTP_02272018_0_2um_scaffold_805_14

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(8877..9611)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase F (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 245.0
  • Bit_score: 409
  • Evalue 3.70e-112
Pseudouridine synthase, Rsu id=1337017 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 244.0
  • Bit_score: 435
  • Evalue 2.20e-119
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 244.0
  • Bit_score: 435
  • Evalue 3.10e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGGCCGAACCCATTCGCCTCTCCAAACTCATGTCCGAGCGCGGGCTCTGCTCGCGCCGCGAGGCCGACAGCTACATCGAGCGCGGGCTGGTGTTCGTCGACGGCACCCGGGTGAGCGAACTCGGCACCAAGGTGGATCCAAACTGCGTGATCCGGCTGGACAACGCGGCCAGCCAGCAGCAACAACAGCGCGTCACCCTCCTGCTGAACAAACCCGTCGGCTATGTGTCGGGCCAGCCCGAGCCCGGCTATCAGCCCGCTGTGGTGCTGATCCGCGCCGATACGCAGTGGCAGGACGGACGCGCCGGCCTGGCGCTCCATCCCATGCATCTGAAAGGCCTGGCCCCCGCCGGCCGGCTCGATATCGATTCGACCGGCCTGTTGGTGTTGACGCAGGATGGGCGCATCGCCAAACAATTAATCGGCGAAAACTCCGACATCGAGAAGGAATATCTGGTGCGCGTCGATGGACGTCTCGATGAACAAGGCCTCGCCCTGCTCAACCACGGTCTCTCGCTGGATGGCCGCAAATTGCGGCCATCCAGGGTCAGCTGGCAGAACGCCGATCAATTGCGCTTCATCTTGAAAGAAGGCCGCAAGCGCCAGATTCGTCGCATGTGCGAACTGGTCGGGCTCAAGGTGGTAGGCCTCAAGCGCGTACGCATCGGCCATGTACGGCTGGGCGACCTGCCGCTGGGGCAGTGGCGCGCCCTGCGGCCGGATGAAAACTTCTAG
PROTEIN sequence
Length: 245
MAEPIRLSKLMSERGLCSRREADSYIERGLVFVDGTRVSELGTKVDPNCVIRLDNAASQQQQQRVTLLLNKPVGYVSGQPEPGYQPAVVLIRADTQWQDGRAGLALHPMHLKGLAPAGRLDIDSTGLLVLTQDGRIAKQLIGENSDIEKEYLVRVDGRLDEQGLALLNHGLSLDGRKLRPSRVSWQNADQLRFILKEGRKRQIRRMCELVGLKVVGLKRVRIGHVRLGDLPLGQWRALRPDENF*