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cn_combo_scaffold_136

Alias: AGR20_11

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Displaying items 1-30 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_136_1
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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191..676
-----------------
DNA (486bp)
protein (162aa)
Nuclease n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QFL0_9RHIZ
Nuclease {ECO:0000313|EMBL:EKF59831.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobac
nuclease
cn_combo_scaffold_136_2
unknown

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comp(881..1279)
-----------------
DNA (399bp)
protein (133aa)

This feature has no annotations

cn_combo_scaffold_136_3
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1279..1989)
-----------------
DNA (711bp)
protein (237aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PG35_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF59833.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
cn_combo_scaffold_136_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2121..3392)
-----------------
DNA (1272bp)
protein (424aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KEM3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KDR89074.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Ag
hypothetical protein
cn_combo_scaffold_136_5
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4085..4354
-----------------
DNA (270bp)
protein (90aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q7Y4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF59834.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
Hypothetical protein
cn_combo_scaffold_136_6
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4317..5555
-----------------
DNA (1239bp)
protein (413aa)
Integrase/recombinase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q3X6_9RHIZ
Integrase/recombinase {ECO:0000313|EMBL:EKF59835.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" so
Integrase family protein
cn_combo_scaffold_136_trna_1
unknown

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comp(5501..5573)
-----------------
DNA (73bp)
transferRNA
cn_combo_scaffold_136_7
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5765..6508
-----------------
DNA (744bp)
protein (248aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QFL3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF59836.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
pp26; immunogenic protein
cn_combo_scaffold_136_8
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6585..7841)
-----------------
DNA (1257bp)
protein (419aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QWX1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF59837.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein rbh
cn_combo_scaffold_136_9
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7999..11760
-----------------
DNA (3762bp)
protein (1254aa)
Methionine synthase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JYB0_AGRVS
metH; B12-dependent methionine synthase rbh
Methionine synthase {ECO:0000313|EMBL:ACM37140.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" sourc
cn_combo_scaffold_136_10
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11986..12855)
-----------------
DNA (870bp)
protein (290aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QPR6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF56962.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein rbh
cn_combo_scaffold_136_11
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12931..14088)
-----------------
DNA (1158bp)
protein (386aa)
Family 1 extracellular solute-binding protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q7R2_9RHIZ
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:EKF56961.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gr
family 1 extracellular solute-binding protein
cn_combo_scaffold_136_12
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14190..15233)
-----------------
DNA (1044bp)
protein (348aa)
Alcohol dehydrogenase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PW80_9RHIZ
Alcohol dehydrogenase {ECO:0000313|EMBL:EKF56960.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" so
Zn-dependent alcohol dehydrogenase rbh
cn_combo_scaffold_136_13
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15308..16360)
-----------------
DNA (1053bp)
protein (351aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobia
ABC transporter permease n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PZU1_9RHIZ
putative ABC transporter, ATP-binding component
cn_combo_scaffold_136_14
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16373..17155)
-----------------
DNA (783bp)
protein (261aa)
ABC transporter n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2P7G2_9RHIZ
ABC transporter {ECO:0000313|EMBL:EKF56958.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="
putative ABC transporter, permease component
cn_combo_scaffold_136_15
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17152..18042)
-----------------
DNA (891bp)
protein (297aa)
ABC transporter n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QPR1_9RHIZ
ABC transporter {ECO:0000313|EMBL:EKF56957.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="
spermidine/putrescine transport system permease protein
cn_combo_scaffold_136_16
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18141..19247)
-----------------
DNA (1107bp)
protein (369aa)
ABC transporter substrate-binding protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q7Q9_9RHIZ
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EKF56956.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
iron III-binding periplasmic protein
cn_combo_scaffold_136_17
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19381..20256)
-----------------
DNA (876bp)
protein (292aa)
RpiR family transcriptional regulator n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PW76_9RHIZ
RpiR family transcriptional regulator {ECO:0000313|EMBL:EKF56955.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agr
transcriptional regulator, RpiR family rbh
cn_combo_scaffold_136_18
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20441..21211
-----------------
DNA (771bp)
protein (257aa)
N-formylglutamate amidohydrolase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PZT7_9RHIZ
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:EKF56954.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobact
N-formylglutamate amidohydrolase rbh
cn_combo_scaffold_136_19
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21317..21826
-----------------
DNA (510bp)
protein (170aa)
Tripartite ATP-independent periplasmic transporter DctQ (Fragment) n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PXD8_9RHIZ
Tripartite ATP-independent periplasmic transporter DctQ {ECO:0000313|EMBL:EKF57360.1}; Flags: Fragment;; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae
tripartite ATP-independent periplasmic transporter DctQ
cn_combo_scaffold_136_20
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21823..23172
-----------------
DNA (1350bp)
protein (450aa)
TRAP dicarboxylate transporter subunit DctM n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q8U8_9RHIZ
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:EKF57361.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium grou
TRAP-type mannitol/chloroaromatic compound transport system, large permease component
cn_combo_scaffold_136_21
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23278..24318
-----------------
DNA (1041bp)
protein (347aa)
TRAP dicarboxylate transporter subunit DctP n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QQZ2_9RHIZ
TRAP dicarboxylate transporter subunit DctP {ECO:0000313|EMBL:EKF57362.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium grou
TRAP dicarboxylate transporter subunit DctP
cn_combo_scaffold_136_22
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24405..25772
-----------------
DNA (1368bp)
protein (456aa)
Glutamine synthetase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2P8W8_9RHIZ
Glutamine synthetase {ECO:0000313|EMBL:EKF57363.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" sou
glnA2; glutamine synthetase
cn_combo_scaffold_136_23
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25877..27262
-----------------
DNA (1386bp)
protein (462aa)
Aldehyde dehydrogenase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q135_9RHIZ
Aldehyde dehydrogenase {ECO:0000313|EMBL:EKF57364.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" s
aldehyde dehydrogenase
cn_combo_scaffold_136_24
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27259..28404
-----------------
DNA (1146bp)
protein (382aa)
Alcohol dehydrogenase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PXE0_9RHIZ
Alcohol dehydrogenase {ECO:0000313|EMBL:EKF57365.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" so
alcohol dehydrogenase iron-type protein
cn_combo_scaffold_136_25
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28671..29390
-----------------
DNA (720bp)
protein (240aa)
ParA chromosome partitioning protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q8V1_9RHIZ
ParA chromosome partitioning protein {ECO:0000313|EMBL:EKF57366.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agro
ParA chromosome partitioning protein rbh
cn_combo_scaffold_136_26
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29503..30852)
-----------------
DNA (1350bp)
protein (450aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2P8X4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF57368.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein rbh
cn_combo_scaffold_136_27
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31010..31492
-----------------
DNA (483bp)
protein (161aa)
MarR family transcriptional regulator n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q138_9RHIZ
MarR family transcriptional regulator {ECO:0000313|EMBL:EKF57369.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agr
MarR family regulatory helix-turn-helix protein 16
cn_combo_scaffold_136_28
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31489..32316
-----------------
DNA (828bp)
protein (276aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PXE3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF57370.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
cn_combo_scaffold_136_29
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32403..32741
-----------------
DNA (339bp)
protein (113aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q8V5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF57371.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
Displaying items 1-30 of 141 in total

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