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SR2-18-B1_coassembly_3851

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-B1_coassembly_3851_1
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(3..1361)
-----------------
DNA (1359bp)
protein (453aa)
PAS/PAC sensor hybrid histidine kinase id=4375936 bin=GWF2_Lentisphaerae_50_93 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
PAS/PAC sensor hybrid histidine kinase
Tax=RBG_16_Spirochaete_67_19_curated
SR2-18-B1_coassembly_3851_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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1465..2391
-----------------
DNA (927bp)
protein (309aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022J5_SOLUE
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABJ84105.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_3851_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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2411..5551
-----------------
DNA (3141bp)
protein (1047aa)
Alpha-L-rhamnosidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01V09_SOLUE
alpha-L-rhamnosidase
Alpha-L-rhamnosidase {ECO:0000313|EMBL:ABJ86506.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_3851_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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5656..9468
-----------------
DNA (3813bp)
protein (1271aa)
TonB-dependent receptor, plug n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029C2_SOLUE
TonB-dependent receptor, plug
TonB-dependent receptor, plug {ECO:0000313|EMBL:ABJ82369.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_3851_5
unknown

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comp(9475..10350)
-----------------
DNA (876bp)
protein (292aa)

This feature has no annotations

SR2-18-B1_coassembly_3851_6
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(10388..11557)
-----------------
DNA (1170bp)
protein (390aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE87591.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Putative uncharacterized protein id=4588143 bin=GWF2_Bacteroidetes_42_66 species=Bacteroides sp. 1_1_30 genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
SR2-18-B1_coassembly_3851_7
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(11583..13109)
-----------------
DNA (1527bp)
protein (509aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00037FB43D
Tax=GWE2_Bacteroidetes_42_39_curated
SR2-18-B1_coassembly_3851_8
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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comp(13128..13796)
-----------------
DNA (669bp)
protein (223aa)
noxC3; nitroreductase (EC:1.-.-.-) id=7200632 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
nfsA3; nitroreductase (EC:1.-.-.-)
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
SR2-18-B1_coassembly_3851_9
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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13930..14349
-----------------
DNA (420bp)
protein (140aa)
hypothetical protein n=1 Tax=Paenibacillus polymyxa RepID=UPI0002FEB9F3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY09920.1}; TaxID=1406 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa (Bacillus polymyxa).;"
SR2-18-B1_coassembly_3851_10
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14354..14710)
-----------------
DNA (357bp)
protein (119aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B6A3DA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
SR2-18-B1_coassembly_3851_11
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

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14760..15920
-----------------
DNA (1161bp)
protein (387aa)
putative methyltransferase CmuC id=16897164 bin=RBG_16_Aminicenantes_66_30 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
putative methyltransferase CmuC
Tax=RBG_16_Chloroflexi_52_11_curated
SR2-18-B1_coassembly_3851_12
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

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15917..16624
-----------------
DNA (708bp)
protein (236aa)
alpha-L-fucosidase; K01206 alpha-L-fucosidase [EC:3.2.1.51] id=24422030 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=Maribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
alpha-L-fucosidase (EC:3.2.1.51)
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
Displaying 12 items

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