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SR2-18-B1_coassembly_63921

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-B1_coassembly_63921_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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1..273
-----------------
DNA (273bp)
protein (91aa)
Major facilitator superfamily MFS_1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QX5_SOLUE
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABJ87945.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_63921_2
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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318..1601
-----------------
DNA (1284bp)
protein (428aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CCF9_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL57604.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
signal peptide
SR2-18-B1_coassembly_63921_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1671..2546)
-----------------
DNA (876bp)
protein (292aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XC38_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF62506.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
RNA polymerase, sigma-24 subunit, ECF subfamily-like hypothetical protein
SR2-18-B1_coassembly_63921_4
RIFOXYA2_FULL_RIF01_40_8_curated, RIF1, Bacteria

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comp(2733..4598)
-----------------
DNA (1866bp)
protein (622aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V102_ROSS1
hypothetical protein
Tax=RIFOXYA2_FULL_RIF01_40_8_curated
SR2-18-B1_coassembly_63921_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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4708..6555
-----------------
DNA (1848bp)
protein (616aa)
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJB8_KORVE id=5225126 bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
signal transduction histidine kinase LytS
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SR2-18-B1_coassembly_63921_6
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6533..7264
-----------------
DNA (732bp)
protein (244aa)
Response regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U364_MYXSD
Response regulator {ECO:0000313|EMBL:AKF79935.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
response regulator
SR2-18-B1_coassembly_63921_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(7274..8335)
-----------------
DNA (1062bp)
protein (354aa)
Pyridoxal-5'-phosphate-dependent protein, beta subunit id=2300072 bin=GWA2_Elusimicrobia_66_18 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
pyridoxal-5'-phosphate-dependent protein subunit beta
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
SR2-18-B1_coassembly_63921_8
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

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8562..9881
-----------------
DNA (1320bp)
protein (440aa)
Acetyl-CoA hydrolase/transferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VE3_SOLUE
acetyl-CoA hydrolase/transferase
Tax=RBG_16_Zixibacteria_53_22_curated
SR2-18-B1_coassembly_63921_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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9904..10158
-----------------
DNA (255bp)
protein (85aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027F1_SOLUE
4Fe-4S ferredoxin
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
SR2-18-B1_coassembly_63921_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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10169..11011
-----------------
DNA (843bp)
protein (281aa)
ketoisovalerate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.7)
2-ketoisovalerate ferredoxin reductase n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI00039D253E
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Displaying 10 items

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