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cn_combo_scaffold_338_7

Organism: CN-SCN_Comamonas_56x

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 14 / 38 MC: 1
Location: comp(4641..5270)

Top 3 Functional Annotations

Value Algorithm Source
Tfp pilus assembly protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375057 similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 186.0
  • Bit_score: 188
  • Evalue 6.90e-45
general secretion pathway, GspH; K08084 type IV fimbrial biogenesis protein FimT Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 185.0
  • Bit_score: 181
  • Evalue 1.20e-42
general secretion pathway, GspH similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 220.0
  • Bit_score: 177
  • Evalue 3.40e-42

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Taxonomy

R_Curvibacter_63_18 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGTACAGGTACTGCAAGTGCCACAAACCGAAAACTCTGCTGGCCATGACTTCTATAGTTTCAAAAACTCGTGACCTCGGTTTTACTTTGATCGAGTTGATGGTCACGGTTTCCATCGCGGCAATTCTCATGATGGTTGCCGCGCCCAGCTTTGTTAGCTATCAGAGAAATTCCGAACTGAGCTCAATTACAAACACATTACTTTCGGCTATCAATGCAGCTCGCGGCGAGGCCATGAAGCGCAACATGTATGCCGGCATTTCACCCAAAGATGGTTCCAACTGGAACAGTGGTTGGATTGTGTATATCGACAGAAATATCGACCACAATTTCAGCACAAGTGATGATGAAATTGTATTTGAACAGTCTTCCCCACCAAGCTATATCGCCATTGCTGGTACGGGCACAGCAAATGAGTCCCCTCCTTATGTTTCTTACAATGGGTCTGGATATCCAAGGAATACGAGTGGTGGATTTGGTGCGCTTACTATCAGCCTCACGCGTAATGACGTCTCAGCCGCAGAAGCAGCAGAGCAGACACGCCGAATCATCGTAGCGGCTTCAGGGAGGACCCGCAGTTGCAAACCATCGTTAGACCCCGCAACATGCAAAGCTAGCGCGACGGAGTAA
PROTEIN sequence
Length: 210
MYRYCKCHKPKTLLAMTSIVSKTRDLGFTLIELMVTVSIAAILMMVAAPSFVSYQRNSELSSITNTLLSAINAARGEAMKRNMYAGISPKDGSNWNSGWIVYIDRNIDHNFSTSDDEIVFEQSSPPSYIAIAGTGTANESPPYVSYNGSGYPRNTSGGFGALTISLTRNDVSAAEAAEQTRRIIVAASGRTRSCKPSLDPATCKASATE*