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CN-SCN_Comamonas_56x

CN-SCN_Burkholderiales_65_60
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 59.59 Longest contig: 610.10 Kbp Bin length: 3.60 Mbp GC content: 65.20 %
Contigs count: 51 Features count: 3497 rRNAs count: 1 tRNAs count: 37

Genome completeness

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 14 / 38 MC: 1

Description

Full 47

Displaying items 1-50 of 51 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_132 BURK59_25
Order: Burkholderiales (83.25%)
585 610097 bp 65.96 60.07 92.11
cn_combo_scaffold_390 BURK59_8
Order: Burkholderiales (89.79%)
284 308987 bp 65.75 61.78 93.49
cn_combo_scaffold_207 BURK59_1
Order: Burkholderiales (74.06%)
266 282228 bp 64.37 58.85 91.20
cn_combo_scaffold_704 BURK59_12
Order: Burkholderiales (85.15%)
229 231755 bp 65.20 62.27 93.12
cn_combo_scaffold_370 BURK59_6
Order: Burkholderiales (88.74%)
151 165005 bp 65.59 61.00 92.09
cn_combo_scaffold_348 BURK59_5
Order: Burkholderiales (85.31%)
143 145932 bp 66.21 60.20 92.58
cn_combo_scaffold_346 BURK59_4
Order: Burkholderiales (78.13%)
128 137466 bp 65.71 61.12 94.02
cn_combo_scaffold_473 BURK59_7
Order: Burkholderiales (82.54%)
126 125879 bp 64.29 61.46 93.16
cn_combo_scaffold_338 BURK59_2
Order: Burkholderiales (71.93%)
114 109611 bp 64.16 58.43 93.16
cn_combo_scaffold_343 BURK59_3
Order: Burkholderiales (92.73%)
110 99791 bp 64.39 57.47 91.90
cn_combo_scaffold_812 BURK59_11
Order: Burkholderiales (87.96%)
108 119896 bp 64.82 59.21 91.45
cn_combo_scaffold_1191 BURK59_18
Order: Burkholderiales (75%)
100 108665 bp 65.08 60.08 92.43
cn_combo_scaffold_1675 BURK59_23
Order: Burkholderiales (86.81%)
91 94785 bp 64.73 58.17 91.67
cn_combo_scaffold_636 BURK59_9
Order: Burkholderiales (84.62%)
91 93688 bp 64.30 64.90 88.96
cn_combo_scaffold_800 BURK59_10
Order: Burkholderiales (78.89%)
90 96064 bp 64.91 57.63 93.61
cn_combo_scaffold_977 BURK59_13
Genus: Acidovorax (52.78%)
72 61466 bp 63.66 59.64 91.26
cn_combo_scaffold_1201 BURK59_16
Order: Burkholderiales (86.76%)
68 78284 bp 64.66 57.51 94.13
cn_combo_scaffold_1347 BURK59_19
Order: Burkholderiales (88.71%)
62 63390 bp 65.00 60.16 94.24
cn_combo_scaffold_1450 BURK59_21
Order: Burkholderiales (88.52%)
61 65301 bp 65.61 55.58 92.40
cn_combo_scaffold_1434 BURK59_20
Order: Burkholderiales (82.14%)
56 55371 bp 65.36 61.63 93.10
cn_combo_scaffold_1000 BURK59_14
Order: Burkholderiales (84.91%)
53 48160 bp 63.06 56.23 91.16
cn_combo_scaffold_2703 BURK59_26
Genus: Acidovorax (55.32%)
47 45324 bp 65.91 59.18 92.28
cn_combo_scaffold_1280 BURK59_17
Genus: Acidovorax (54.55%)
44 44834 bp 65.65 59.29 92.65
cn_combo_scaffold_1077 BURK59_15
Class: Betaproteobacteria (61.9%)
42 49902 bp 66.36 63.68 94.95
cn_combo_scaffold_1618 BURK59_22
Class: Betaproteobacteria (96.88%)
32 32293 bp 67.42 65.37 97.04
cn_combo_scaffold_1889 BURK59_24
Genus: Acidovorax (51.61%)
31 28705 bp 63.29 59.26 93.04
cn_combo_scaffold_2957 BURK59_29
Class: Gammaproteobacteria (61.54%)
26 19170 bp 64.91 45.73 86.34
cn_combo_scaffold_2775 BURK59_27
Order: Burkholderiales (68%)
25 20163 bp 66.94 59.69 88.36
cn_combo_scaffold_7454 BURK59_43
Order: Burkholderiales (73.91%)
23 21219 bp 69.48 31.57 90.34
cn_combo_scaffold_3168 BURK59_31
Species: Alicycliphilus denitrificans (85.71%)
21 17989 bp 66.84 61.50 90.52
cn_combo_scaffold_5802 BURK59_37
Species: Delftia acidovorans (75%)
20 19575 bp 65.66 61.61 92.78
cn_combo_scaffold_2796 BURK59_28
Genus: Alicycliphilus (63.16%)
19 20072 bp 65.33 61.41 92.09
cn_combo_scaffold_3064 BURK59_30
Order: Burkholderiales (73.68%)
19 19146 bp 69.27 67.58 93.89
cn_combo_scaffold_3637 BURK59_32
Order: Burkholderiales (94.74%)
19 16491 bp 65.26 61.07 87.28
cn_combo_scaffold_11402 BURK59_51
Order: Burkholderiales (63.16%)
19 12844 bp 66.04 64.45 78.34
cn_combo_scaffold_5140 BURK59_35
Order: Burkholderiales (76.47%)
17 16089 bp 58.47 54.31 76.17
cn_combo_scaffold_6167 BURK59_38
Class: Betaproteobacteria (71.43%)
14 10338 bp 55.57 31.80 82.76
cn_combo_scaffold_4663 BURK59_33
Species: Alicycliphilus denitrificans (58.33%)
12 12611 bp 63.09 54.38 91.09
cn_combo_scaffold_6864 BURK59_41
Species: Thauera linaloolentis (55.56%)
9 8877 bp 67.46 38.28 91.15
cn_combo_scaffold_6402 BURK59_39
Phylum: Proteobacteria (71.43%)
7 9438 bp 64.66 48.72 93.36
cn_combo_scaffold_6809 BURK59_40
Phylum: Proteobacteria (85.71%)
7 8951 bp 62.97 31.14 92.91
cn_combo_scaffold_8278 BURK59_44
Order: Burkholderiales (71.43%)
7 7534 bp 69.58 37.34 91.66
cn_combo_scaffold_9971 BURK59_49
Species: Alicycliphilus denitrificans (85.71%)
7 6333 bp 65.25 59.99 97.06
cn_combo_scaffold_10201 BURK59_50
Order: Burkholderiales (85.71%)
7 6668 bp 69.11 60.56 93.18
cn_combo_scaffold_12825 BURK59_55
Species: Pseudomonas stutzeri (57.14%)
7 5690 bp 65.45 50.67 76.71
cn_combo_scaffold_11781 BURK59_53
Species: RIFOXYA1_FULL_Xanthomonadales_69_10_curated (66.67%)
6 5648 bp 66.80 50.81 87.00
cn_combo_scaffold_9522 BURK59_47
Order: Burkholderiales (80%)
5 6604 bp 62.51 57.60 91.76
cn_combo_scaffold_11574 BURK59_52
Class: Gammaproteobacteria (80%)
5 5499 bp 59.70 55.85 86.52
cn_combo_scaffold_12331 BURK59_54
Order: Burkholderiales (100%)
5 5185 bp 67.73 58.24 90.67
cn_combo_scaffold_9397 BURK59_46
Genus: Bradyrhizobium (50%)
4 6686 bp 60.36 40.01 97.77
Displaying items 1-50 of 51 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.