ggKbase home page

cn_combo_scaffold_2775

Alias: BURK59_27

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2775_1
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..437
DNA (435bp) protein (145aa)
Transcriptional regulator, LysR family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W7V9_ACISJ
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABM42334.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
cn_combo_scaffold_2775_2
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(598..1014)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGJ9_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM94688.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM
cn_combo_scaffold_2775_3
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1048..1314)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGJ8_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM94687.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM
cn_combo_scaffold_2775_4
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1335..2051)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGJ7_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM94686.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM
cn_combo_scaffold_2775_5
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2079..2420)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGJ6_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXU78501.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1
cn_combo_scaffold_2775_6
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2624..3712
DNA (1089bp) protein (363aa)
Predicted lipocalin-related protein and Bos/Can/Equ allergen family n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGJ5_METPP
lipocalin-like protein
Predicted lipocalin-related protein and Bos/Can/Equ allergen family {ECO:0000313|EMBL:ABM94684.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" s
cn_combo_scaffold_2775_7
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3829..4347
DNA (519bp) protein (173aa)
UPF0114 protein Mpe_A1723 n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGJ4_METPP
hypothetical protein
UPF0114 protein Mpe_A1723 {ECO:0000256|HAMAP-Rule:MF_00143}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (str
cn_combo_scaffold_2775_8
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4362..5327
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGJ3_METPP
Diacylglycerol kinase {ECO:0000313|EMBL:EXU80276.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA187
hypothetical protein
cn_combo_scaffold_2775_9
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5324..6121
DNA (798bp) protein (266aa)
Putative DNA repair exonuclease n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGJ2_METPP
DNA repair exonuclease {ECO:0000313|EMBL:EXU80275.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA18
DNA repair exonuclease
cn_combo_scaffold_2775_10
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6257..6439
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:EXU80274.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1
cn_combo_scaffold_2775_11
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6493..6927
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGJ0_METPP
Uncharacterized protein {ECO:0000313|EMBL:EXU80273.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1
hypothetical protein
cn_combo_scaffold_2775_12
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6949..7830)
DNA (882bp) protein (294aa)
Transcriptional regulator, LysR family n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGI9_METPP
LysR family transcriptional regulator {ECO:0000313|EMBL:EXU80272.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamona
LysR family transcriptional regulator
cn_combo_scaffold_2775_13
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7962..9047
DNA (1086bp) protein (362aa)
Na+/Ca+ antiporter, CaCA family n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZMM1_THASP
CaCA family Na+/Ca+ antiporter
Na+/Ca+ antiporter, CaCA family {ECO:0000313|EMBL:ACK53065.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain
cn_combo_scaffold_2775_14
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9052..11898
DNA (2847bp) protein (949aa)
monovalent cation/H+ antiporter subunit A (EC:1.6.99.5)
Uncharacterized protein {ECO:0000313|EMBL:KFL36963.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
NADH dehydrogenase (Quinone) id=2651954 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
cn_combo_scaffold_2775_15
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11901..12245
DNA (345bp) protein (115aa)
cation:proton antiporter n=1 Tax=Rhizobium giardinii RepID=UPI00037434EC
Uncharacterized protein {ECO:0000313|EMBL:KFN48302.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli
monovalent cation/H+ antiporter subunit C
cn_combo_scaffold_2775_16
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12242..13864
DNA (1623bp) protein (541aa)
monovalent cation/H+ antiporter subunit D (EC:1.6.99.5)
Putative monovalent cation/H+ antiporter subunit D n=1 Tax=Oceanibaculum indicum P24 RepID=K2JGR6_9PROT
Putative monovalent cation/H+ antiporter subunit D {ECO:0000313|EMBL:EKE69839.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibacul
cn_combo_scaffold_2775_17
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13861..14364
DNA (504bp) protein (168aa)
Putative monovalent cation/H+ antiporter subunit E n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWR5_PSEUP
putative monovalent cation/H+ antiporter subunit E
Putative monovalent cation/H+ antiporter subunit E {ECO:0000313|EMBL:AER57762.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthom
cn_combo_scaffold_2775_18
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14361..14633
DNA (273bp) protein (91aa)
Multisubunit potassium/proton antiporter, PhaF subunit n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BR79_9GAMM
Multisubunit potassium/proton antiporter, PhaF subunit {ECO:0000313|EMBL:EIJ33872.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" s
multiple resistance and pH regulation protein F
cn_combo_scaffold_2775_19
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14644..15000
DNA (357bp) protein (119aa)
Putative monovalent cation/H+ antiporter subunit G id=2991972 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
putative monovalent cation/H+ antiporter subunit G; K05564 multicomponent K+:H+ antiporter subunit G Tax=GWF1_Xanthomonadales_69_6_curated
monovalent cation/H+ antiporter subunit G
cn_combo_scaffold_2775_20
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15252..15671
DNA (420bp) protein (140aa)
Putative membrane protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGI8_METPP
Uncharacterized protein {ECO:0000313|EMBL:EXU80271.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1
hypothetical protein
cn_combo_scaffold_2775_21
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15875..16474
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZJK1_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EXU80268.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1
ABC transporter permease-like protein
cn_combo_scaffold_2775_22
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16494..16970
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGI5_METPP
Membrane protein {ECO:0000313|EMBL:EXU80267.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
hypothetical protein
cn_combo_scaffold_2775_23
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17588..18784)
DNA (1197bp) protein (399aa)
Transposase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G7Q9_ALIDK
putative transposase Tax=CG_Rhodof_04
transposase
cn_combo_scaffold_2775_24
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18792..19667)
DNA (876bp) protein (292aa)
phage integrase id=5081861 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
phage integrase
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
cn_combo_scaffold_2775_25
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20001..20162)
DNA (162bp) protein (54aa)
Phage integrase family protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W7C8_ACISJ
phage integrase family protein
Integrase {ECO:0000313|EMBL:KFJ91500.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
Displaying 25 items

View Taxonomy