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cn_combo_scaffold_636_3

Organism: CN-SCN_Comamonas_56x

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 14 / 38 MC: 1
Location: 1654..2589

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WBL0_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 311.0
  • Bit_score: 542
  • Evalue 2.80e-151
RNA polymerase sigma-32 subunit RpoH similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 311.0
  • Bit_score: 542
  • Evalue 7.90e-152
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 311.0
  • Bit_score: 542
  • Evalue 3.90e-151

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Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGACCTTGAACAACGCTTCCGCTGCAACGACACTGGCGTCCGCGAATCCGTGGGCGGTGGTGCCGCCGCTGGGCAATCTGGACGCGTATATCACGGCAGTCAACCGCTTGCCCATGCTGACACTGGAAGAAGAGCAGCGTTACGCCCGGGAATTGCGTCAAGACAACAACGTCGAATCTGCCGGGCGCCTCGTGCTCTCGCACTTGCGTCTGGTCGTTGCCATCTCGCGCCAATACCTGGGCTACGGTCTGCCACACGGCGACCTGATCCAGGAAGGCAACATCGGGCTCATGAAGGCCGTCAAACGCTTCGATCCGGACCAAGGGGTACGTTTGGTGAGCTACGCCATGCACTGGATCAAGGCGGAGATTCACGAATACATTCTGAAAAACTGGCGCATGGTGAAGGTCGCAACCACCAAGGCCCAGCGCAAGCTGTTCTTCAACCTGCGTTCGATGAAGCAGGAGTTCAAGGCCGACGTAGAAGATGCCCAGACTTATCGCGAAACGCTGACCGAGCATGAGATCGACACCGTTGCACGCCAGCTCAATGTCAAGCCGGAAGAAGTGATCGAGATGGAAACGCGCATGTCCGGCGGCGACGTGCTGCTCGACCCTGCGCCCAATGACGATGGTGAAGTGGCGTTCGGGCCGATTGCCTATCTTTCGGATGCCGCGCACGAACCCACGTCGATGATTGAATCACGCCAGCGTGATGTACTCGCCTCCCAAGGGATTTCGACAGCGCTTGAAGGGCTGGACGCGCGCAGTCGCCGCATCGTCGAGGAGCGCTGGCTCAAGGTCAACGATGACGGCTCCGGCGGTATGACGCTGCATGAGCTCGCCACGGAGTACGGCGTCAGCGCCGAGCGCATCCGCCAGATCGAAGTGGCGGCCATGAAGAAAATGAAGAAGGCGTTGGCCGAATACGCCTGA
PROTEIN sequence
Length: 312
MTLNNASAATTLASANPWAVVPPLGNLDAYITAVNRLPMLTLEEEQRYARELRQDNNVESAGRLVLSHLRLVVAISRQYLGYGLPHGDLIQEGNIGLMKAVKRFDPDQGVRLVSYAMHWIKAEIHEYILKNWRMVKVATTKAQRKLFFNLRSMKQEFKADVEDAQTYRETLTEHEIDTVARQLNVKPEEVIEMETRMSGGDVLLDPAPNDDGEVAFGPIAYLSDAAHEPTSMIESRQRDVLASQGISTALEGLDARSRRIVEERWLKVNDDGSGGMTLHELATEYGVSAERIRQIEVAAMKKMKKALAEYA*