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cn_combo_scaffold_977_3

Organism: CN-SCN_Comamonas_56x

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 14 / 38 MC: 1
Location: comp(1732..3378)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Pseudomonas sp. VLB120 RepID=U5VEB8_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 547.0
  • Bit_score: 485
  • Evalue 5.50e-134
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 547.0
  • Bit_score: 485
  • Evalue 1.50e-134
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AGZ35197.1}; TaxID=69328 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 547.0
  • Bit_score: 485
  • Evalue 7.70e-134

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Taxonomy

Pseudomonas sp. VLB120 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1647
ATGTCACAAGAAGAAGACTACCAACCGTCGCTGGCCGACTACATCGCCATGGTCAAGCGCCATGTGCTGCTCATCGCCGTCACCTTCATCAGCGTATCGGCCGTGGCCATCACGGCGGCAGTGCTCTGGCCGCCGGTGTACCAGTCCACCGGCACCATCATGGTCGAATCGCAGCAAATCCCCACGGATCTGGTGCAGGCCACCGTGACCAGCTTTGCCGACGAGCGCATCCAAGTGATTCGCCAGCGCGTGATGACGCGCGAGAACCTCATGCGCATCATCGACAAATTCAAGCTCTTCGATGAGCGCTCCATCACCTTCACGCCGTCCGAGCAGGTCGACAAGATGCGCGACCTGATCGACGTGCAGCTCGTCAATGCCAACGTGCAGGGCCAGCGCGGCTCGGCCACCATCGCCTTCAAGGTCTCGTTCGAAGACCGCCGCCCCGATGTGGCCCAGCGCGTGGCCAACGAGCTGGTGACGCTGTTCCTGAACGAGAACGTCAAGGTGCGCACTGAACGTGCCACGCAAACTACGGAATTCCTCACGCAGGAGGCCAACAAATTCAAGAGCGATCTGGACAAACTGGAAAGCCAGATCGCCACCTACAAGCAGGAAAACGGTGCGGCCTTGCCGCAGAACACCGCGCTGGCGATGAACGCCATCCAGCGCCTGGAGTCCGATCTGCGCAATTCGCAGCGCGACTACAACTCTGCAGAAGAAGAAGCCCGCTCGCTCGACGTGGAGCTGGCCAGCGCCAAGGTGGCCGTCGCCAGTGCCGCCGCGGCCGCCGGCGGGGGCACCTCCGCTGCCGGCATGGTCGATGCCAACGTGGTCGAGCTGCAGAAACTGCGCCAGCAGCTGGCGCAGCTGCAAGAGCTCTATACCGATAGCTACCCCGATGTGCGCACCACCAAGCGCCGCATTGCCGCGCTGGAAAAGGCCATTGCCGAAGCCGCAAAAGAGCCTGCGCCCGCGCCACCCGCCGCCGACGCCAACCTGCCCGTGCCACCTACTGTGGCGGCGGCGCAGATGGTCGTGGCCAAGATCGAATCGCGCATCGCCTCCGCGCGTTCGCGCATGACGGCGCTGCGCGCCGAGCAAGGCCAGATCCAGGCGCAGCTGCGCGCAGCGGAAAACCAGATGCTCAAGGCCCCGCAGGTCGAGCGCGGCCTCGCCGCCCTGATGCGCGACCGCGAGGCCGCGCAGCGCAAATACGAGGAAATCCGCGCCAAGCAGATGAACGCCCAGGTTGCCGAAAACCTCGAAGGTGAGCAAAAAGCAGAGCGCTTCACGCTGCTGGAGCCGCCGATTGCGCCCGATCGGCCCATCAAACCCAACCGGCGCAAGATGATCGCGCTCGGCCTGGTGCTGGCCGCCGTGGCTGCCGCCGGCATGGTGGTGCTGCTCGAAACCTTGCGCGGCACCGTGCGCGGGGTGGGCGCTCTCACTGCCATCGTCGGCCAGCGCCCGCTGGTCATCGTGCCCTACATTGCGATTGCCGAAGAGGGCATGCGCCGGCGCAAGCGCTGGCTCGCTGCCGCGACCGCAGGTGCCGTGGCGCTGGTGCTGACGCTGGCGGCCATCCATTTCTTCTACATGCCGCTGGACCTGCTGGCATTCAAGATCATGCTGCGGCTCTCGTAG
PROTEIN sequence
Length: 549
MSQEEDYQPSLADYIAMVKRHVLLIAVTFISVSAVAITAAVLWPPVYQSTGTIMVESQQIPTDLVQATVTSFADERIQVIRQRVMTRENLMRIIDKFKLFDERSITFTPSEQVDKMRDLIDVQLVNANVQGQRGSATIAFKVSFEDRRPDVAQRVANELVTLFLNENVKVRTERATQTTEFLTQEANKFKSDLDKLESQIATYKQENGAALPQNTALAMNAIQRLESDLRNSQRDYNSAEEEARSLDVELASAKVAVASAAAAAGGGTSAAGMVDANVVELQKLRQQLAQLQELYTDSYPDVRTTKRRIAALEKAIAEAAKEPAPAPPAADANLPVPPTVAAAQMVVAKIESRIASARSRMTALRAEQGQIQAQLRAAENQMLKAPQVERGLAALMRDREAAQRKYEEIRAKQMNAQVAENLEGEQKAERFTLLEPPIAPDRPIKPNRRKMIALGLVLAAVAAAGMVVLLETLRGTVRGVGALTAIVGQRPLVIVPYIAIAEEGMRRRKRWLAAATAGAVALVLTLAAIHFFYMPLDLLAFKIMLRLS*