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cn_combo_scaffold_1077_26

Organism: CN-SCN_Comamonas_56x

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 14 / 38 MC: 1
Location: 30143..30928

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide deacetylase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y055_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 252.0
  • Bit_score: 260
  • Evalue 1.80e-66
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 252.0
  • Bit_score: 260
  • Evalue 5.00e-67
Polysaccharide deacetylase {ECO:0000313|EMBL:ACB35336.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 5 similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 252.0
  • Bit_score: 260
  • Evalue 2.50e-66

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGAAACCGCTGGTGCTCCTGATGTACCACGCGCTCTACGCGGACGAACGCGAGCTCGCCGACATCGATCCGCCCGACCGCCCGTATGCGGTATCGGTGTCCAACTTCGAGCGTCAACTCGAACTGATCGGGGAAGCAGGCATCCCCGTCATCGACCCGCGAACGCTCGACCGCGACGCGCCGACCAGCGGCGGTGTCGTCCTGACCTTCGACGACGGGCACGCAAGCAACCGCATCCATGCACTCGACCGACTTGTTCGGCGCGGGTACCGGGGCGCGTTCTTCGTGACGACCGACTTCGTCGGCCGGCGACCCGGTTTCTCCACCTGGGGGCAACTGGTCGACATGCATCGATGCGGGATGACGATCGGCGCGCACGGCCGCACGCACCGTTTCTTCGATGATCTCGACGACGCGGCGTCACGCGCCGAGTTCGCCGCGTCGCGCAGTGCGATCGAGGATGCACTCGGGGCGGAAGTCCGTCAGATGTCGTTTCCAGGCGGACGTTTCCGTCGCCGCCAACTGCGTTTCGGCCAGGAAGCCGGTTTTCGCATCTTTCACGGCTCGAACGTCGGCGTTCATCGACCGGAACCGGTTGCCGCGGGCACGGTACTGCCGCGGATCGCGGTGAGACAGGCGACCAACGAGCGTCGCTATCGCGACATGATCTCTGCAGCACCGCTCTGGCTGTTTCGCGCGCGCCTGTCCGCCAATGCGAAGACGCTCGTGCGCCGAACGGCAGGCAACCGGATTTATCACGCATTGTATGAAAAGCTCGCCGGCTGA
PROTEIN sequence
Length: 262
MKPLVLLMYHALYADERELADIDPPDRPYAVSVSNFERQLELIGEAGIPVIDPRTLDRDAPTSGGVVLTFDDGHASNRIHALDRLVRRGYRGAFFVTTDFVGRRPGFSTWGQLVDMHRCGMTIGAHGRTHRFFDDLDDAASRAEFAASRSAIEDALGAEVRQMSFPGGRFRRRQLRFGQEAGFRIFHGSNVGVHRPEPVAAGTVLPRIAVRQATNERRYRDMISAAPLWLFRARLSANAKTLVRRTAGNRIYHALYEKLAG*