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cn_combo_scaffold_6864_9

Organism: CN-SCN_Comamonas_56x

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 14 / 38 MC: 1
Location: comp(8341..8877)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor id=12496989 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 179.0
  • Bit_score: 352
  • Evalue 3.10e-94
RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 178.0
  • Bit_score: 335
  • Evalue 4.20e-89
RNA polymerase sigma factor RpoS similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 178.0
  • Bit_score: 333
  • Evalue 4.20e-89

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
CGCCAGAACATCGAGCGCGCGATCATGAACCAGTCGCGCACCATCCGCCTGCCGGTGCACGTCATCAAGGAACTCAACATCTACCTGCGGGCGCAGCGCCATCTGGAGACGCACGGCGTCACCGACGCCACCAGCGAGGACATCGCCGCGCTCACCGGCCATCCGGTCGAGGACGTGCGCCGCATCATGCAGCTGAACGAACGGGTGGCTTCGCTCGATGCGCCGCTCGACGTCGATCCCACGCTTTCGCTCGGCGAGGCCATCGCCGACGACAACGCCCATCTGCCCGACGAGATGCTCCAGCTCGACGAGATCGAGCATCACGTCCGCGAATGGCTGAAACAGCTCAACGACAAGCAGCGCTGGGTGATCGAGCGCCGTTTCGGGCTCAACAACTGCGAGGCTTGCACGCTGGAGGACCTGGCGATCGAACTGCAGGTCACCCGCGAACGCGTGCGGCAGATCCAGATGGAGTCGCTGCGCATCCTCCGGCAGATACTGCGCCGGCGGGGCGTATCCAAGGACCAGCTGTTCTGA
PROTEIN sequence
Length: 179
RQNIERAIMNQSRTIRLPVHVIKELNIYLRAQRHLETHGVTDATSEDIAALTGHPVEDVRRIMQLNERVASLDAPLDVDPTLSLGEAIADDNAHLPDEMLQLDEIEHHVREWLKQLNDKQRWVIERRFGLNNCEACTLEDLAIELQVTRERVRQIQMESLRILRQILRRRGVSKDQLF*