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cn_combo_scaffold_8278_5

Organism: CN-SCN_Comamonas_56x

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 14 / 38 MC: 1
Location: 4493..5413

Top 3 Functional Annotations

Value Algorithm Source
mechanosensitive ion channel; K03442 small conductance mechanosensitive channel Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 275.0
  • Bit_score: 310
  • Evalue 3.20e-81
Mechanosensitive ion channel id=3903276 bin=GWC2_Methylomirabilis_70_16 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 288.0
  • Bit_score: 307
  • Evalue 1.50e-80
mechanosensitive ion channel MscS similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 304.0
  • Bit_score: 297
  • Evalue 4.30e-78

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Taxonomy

R_Betaproteobacteria_65_24 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGCGCGAACAGCTGCTCGAACTGAAGGCGTGGATCACCCCGTACGCGGCCGAGCTGCGCGTCGCGGCCTCGATCGTCGGCGTGCTGCTGATCGCGTTCGTGCTGCGCTACGTGGCCAACCGGTTGCTGCGCCGCTTCTTCGTCGGCGTGTCCGATCGCGCCCCGTCGGTCGAGGAGCGGCGTCGCGTGGAAACGGTGGGCAAGGTGCTGCGACACACCGTCTCGGCGCTGATCCTGATCGTCGCCGCGCTCGTGATGCTCAACCAGCTGGGCATCTCGATCGCGCCGATTCTCGGCGCCGCCGGCGTCGTCGGCATCGCGGTGGGCTTCGGCGCGCAGAGCCTGGTGAAGGACATCTTCGCCGGATTCTTCCTGCTGATCGAGAACCAGATCCGCGTCGGCGACGTGGTCGAGATCGCGGGCAAGTCGGGCGTCGTCGAGCAGCTGAGCCTGCGCCGCACGAAGCTGCGCAGTTACGATGGCAGCGTCCACTACATCTCGAACGGGCTGATCACGACCGTGACCAACATGTCGACCGAGTTCGCGTTCGCGGTCGTCGACATCGGCGTGGCCTATCGCGAGGACATCGACCGCGTCTACGCGGTCATGCGCGACACGGCCGATGCGCTGCGCGGGACGGCCGACTTCGGGCCGAAGATCATCGGCGACCTCGAGATCGCCGGCGTCGATCAGTGGGCCGACTCGGCGGTCATGATCCGGGCGCGCATCCGCACGCAGCCGCTGGACCAGTGGAGCGTGCGGCGTGAGTACCTCAAGCGGCTGAAGGCGGCGTTCGATCGCGAGGACATCTCGATCCCGTTCCCCCACCGCACGCTGATGGTCGAAGGTGGGTCGATCCTGCCGACGCCCGAAGCCCCCGAGGCCGGCGCGCGCCCTGATCGGGCGGCACGCGCTACGTGA
PROTEIN sequence
Length: 307
MREQLLELKAWITPYAAELRVAASIVGVLLIAFVLRYVANRLLRRFFVGVSDRAPSVEERRRVETVGKVLRHTVSALILIVAALVMLNQLGISIAPILGAAGVVGIAVGFGAQSLVKDIFAGFFLLIENQIRVGDVVEIAGKSGVVEQLSLRRTKLRSYDGSVHYISNGLITTVTNMSTEFAFAVVDIGVAYREDIDRVYAVMRDTADALRGTADFGPKIIGDLEIAGVDQWADSAVMIRARIRTQPLDQWSVRREYLKRLKAAFDREDISIPFPHRTLMVEGGSILPTPEAPEAGARPDRAARAT*