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cn_combo_scaffold_9522_5

Organism: CN-SCN_Comamonas_56x

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 14 / 38 MC: 1
Location: comp(5530..6387)

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKZ4_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 262.0
  • Bit_score: 318
  • Evalue 7.90e-84
RecA/RadA recombinase similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 256.0
  • Bit_score: 324
  • Evalue 4.00e-86
RecA/RadA recombinase {ECO:0000313|EMBL:CDM25474.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defr similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 256.0
  • Bit_score: 324
  • Evalue 2.00e-85

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGGATGGACATGCGGCGGCGCTTGTGATACTGTATATAAATACATTATTCATGCCGAAGATGTCTCCGCTTCGTTCCTGTTCCTCACCGGTCGCTGCCAACGAATGCGGCAAGTCGGCGCCACCGCTGCCTCCCGCCGTGGCCCGGGCCGTGTGGCGCGGTGATGAATTGGGCCATCGCATGGCAGGCACCAGACCCACGGGGTGGGCGGCATTGGACGCCGAACTTCCCGCAGGGGGATGGCCTCAGCAGGCGGTCATCGAGGTACTGGCAACCCAGCCTGCGGTACTCGAATGGCGCCTGTTGGCGCCTGCGCTACGCCCCGTGGTCGAGGCCGGCGGGCAGGTTGTCGTCATCGGTCCACCCCGGCATCCGCATCTGCCAGGCCTGCAGCAAGTGGGCCTGAGCGAGAGGCAGTTCATCTGGATTCAAGCAGACCTGCCGGCGGAGCGCCTGTGGACTACCGAGCAGCTCATCAAGTCGAATGCGGCCGGCGCCATACTCTCGTGGCTGCCCAAGGCGCGCCCCGAGCAGCTGCGGCGCCTGCAGGTCTGCGCACAGGCTTGCGACGCCCTGGTATTCCTTTGCAGGCCCGAGGCCGCCCGCCATGAGTCCTCCGCATCCCCATTGCGGATTTACGCATCGGTGGGAGTGGACTGGGAATTGAACGTGCGTATCCTGAAACGGCGAGGCCCATCGCACGAAGACGTACTGACCTTGCCCTCAGTGCCGGGCGGTCTCGTTTCGGTGCTGACCCCGCGGCTGCGTCACCCCAGCCGTCTGATTCTCCGAGAGGCCGCCGATGTTGTGGGCAGCCCTGTTGGTACCCCCCAGCACAGACAGCAAGCGGCCGCCTGA
PROTEIN sequence
Length: 286
MDGHAAALVILYINTLFMPKMSPLRSCSSPVAANECGKSAPPLPPAVARAVWRGDELGHRMAGTRPTGWAALDAELPAGGWPQQAVIEVLATQPAVLEWRLLAPALRPVVEAGGQVVVIGPPRHPHLPGLQQVGLSERQFIWIQADLPAERLWTTEQLIKSNAAGAILSWLPKARPEQLRRLQVCAQACDALVFLCRPEAARHESSASPLRIYASVGVDWELNVRILKRRGPSHEDVLTLPSVPGGLVSVLTPRLRHPSRLILREAADVVGSPVGTPQHRQQAAA*