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cn_combo_scaffold_10046_8

Organism: CN-SCN_Lautropia_89x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 4180..8232

Top 3 Functional Annotations

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Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 999.99
  • Bit_score: 2272
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 999.99
  • Bit_score: 2272
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FK81_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 999.99
  • Bit_score: 2272
  • Evalue 0.0

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Taxonomy

Burkholderia ambifaria → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4053
ATGGCCACCCCTTCCCAGTACTCGTTCACCGAGAAGAAGCGCATCCGCAAGAGCTTCGCCAAGCGGCGCGTGGTGCTCGACGTGCCGCAGGCCGACGTCGCGCCCGAGGCGCGCGCGCCCGAAGGGCTGCAGGCCGCTTTCGGCTCGATCTTCCCGATCGTCTCGCACAACGAGTTCGCGCGGCTCGAGTTCGTCAACTATGCGCTGGGCAACGCGCCGTTCGACGTCAAGGAATGCCAGCAGCGCGGCCTCACCTTTTGCGCCCCGCTGCGCGCGAAGGTGCGCCTGGTGATCATGGACCGCGAGGCGGCCAAGCCGACCGTCAAGGAAGTCAAGGAGCAGGAGGTCTACATGGGCGAGATCCCGCTCATGACGACCACCGGCTCGTTCATCGTCAACGGCACCGAGCGCGTCATCGTCTCGCAGCTGCACCGTTCGCCGGGCGTGTTCTTCGAGCATGACCGCGGCAAGACGCACAGCTCGGGCAAGCTGCTGTTCTCGGCGCGCATCATCCCGTATCGCGGCTCGTGGCTTGACTTCGAGTTCGACCCGAAGGACATCCTCTACTTCCGCGTCGACCGGCGCCGCAAGATGCCGGTGACGATCCTGCTGAAGTCGATCGGCCTCACGCCCGAGCAGATCCTCGCGCACTTCTTCGTGTTCGACAGTTTCCGGCTGATGAACGAAGGCGCGCAGCTCGAGCTGGTTCCCGAGCGCCTGCGCGGGGAGATCGCGCGCTTCGACCTCGTCGACAGGGACGGCAAGGTCATCGTCGCGAAGGACAAGCGGATCAACGCCAAGCACATCCGCGACATGGAAGCGGCCGGCATGAAGCACGTGTCGGTGCCCGAAGACTACCTGCTCGGGCGCACGCTCGCGCACAACGTCGTCGACGCCGAGACCGGCGAGATCGTCGCGAAGGCCAACGACGAACTGACCGAAGAGCTGCTGAAGAAGCTGCGCGCGGCCAACGTGCGCGAGATCCGCGCGATCTACACCAACGACCTCGACCAGGGCCCGTACATCTCGCAGACGCTGCGCATCGACGAGACCGCCGACCAGATGGCCGCGCGCATCGCGATCTACCGGATGATGCGACCCGGCGAGCCGCCCACCGAAGACGCGGTCGAGGCGCTGTTCAACCGGCTGTTCTACAGCGAGGACGCCTACGACCTGTCGAAGGTCGGCCGAATGAAGTTCAATCGCCGGGTGGCCCGCGAGGAGCTCACCGGCCCGATGACGCTCACCAACGAGGACATCCTCGCGGTCATCAAGATCCTGGTCGACCTGCGCAACGGCAAGGGCGAGATCGACGACATCGACCACCTGGGCAACCGCCGCGTGCGCTGCGTGGGCGAACTGGCCGAGAACCAGTTCCGGGCCGGCCTGGTGCGCGTCGAGCGCGCGGTCAAGGAGCGCCTCGGCCAGGCCGAGACCGAGAACCTGATGCCGCACGACCTGATCAACAGCAAGCCGATCTCTTCGCAGCTGTCGCAGTTCATGGACCAGACCAACCCGCTGTCCGAGATCACGCACAAGCGTCGCGTCTCGGCACTGGGCCCGGGAGGCCTGACCCGCGAGCGCGCCGGCTTCGAGGTGCGCGACGTGCACCCCACCCACTACGGCCGTGTGTGCCCGATCGAGACGCCCGAGGGCCCGAACATCGGCCTGATCAACTCGCTGTCGCTGTACGCGCGCCTGAACGAATACGGCTTCCTCGAGACGCCGTACCGCAAGGTGGTCGACAACCGCGTCACCGACGAGATCCACTACCTGTCGGCGATCGAGGAAGGCCGCTACGTGATCGCCCAGGCCAACGCGGCAGTCGACGAGAACGGCAGGCTCACCGGCGACCTCGTCTCGGTGCGCAAGGCCGGTGAGTCGGAGCTCACCTCCCCCGAGCACGTGCAGTACATGGACGTGGCACCGTCGCAGATCGTCTCGGTGGCGGCGTCGCTGATCCCGTTCCTCGAGCACGACGACGCCAACCGCGCGCTGATGGGCTCGAACATGCAGCGCCAGGCGGTACCCTGCCTGCGCCCCGAGAAGCCCCTGGTGGGCACCGGCATCGAGCGCACCTGCGCGGTCGACTCGGGCACGGTCGTGGCCGCGTTGCGCGGCGGCGTCGTCGACTACGTCGACGCCGACCGCATCGTGGTTCGGGTCAACGACGCCGAGGCCGCCGCCGGCGAGGTGGGCGTCGACATCTACAACCTGATCAAGTACACGCGCAGCAACCAGAACACGAACATCAACCAGCGGCCGATCGTCCGCAAGGGCGACGTCATCGCGCGCGGCGACGTGATCGCCGACGGCGCGTCCACCGACCTGGGCGAGCTGGCGCTCGGCCAGAACATGCTGGTCGCGTTCATGCCCTGGAACGGCTACAACTTCGAAGACTCGATCCTGATCTCGGAGAAGGTCGTCGCCGACGATCGCTACACCTCGATCCACATCGAGGAACTGTCGGTGCTGGCGCGCGACACGAAGCTGGGCCCCGAGGAGATCACGCGCGACATCTCGAACCTGTCCGAGTCGCAGCTCGGCCGGCTCGACGATTCCGGCATCGTCTACATCGGCGCCGAGGTTCAGGCCGGCGACACGCTGGTGGGCAAGGTCACGCCGAAGGGCGAGACGCAGCTCACGCCCGAGGAGAAGCTGTTGCGCGCGATCTTCGGCGAGAAGGCGTCCGACGTGAAGGACACCTCGCTGCGCGTGCCCTCGGGCATGAGCGGCACGGTGATCGACGTGCAGGTGTTCACCCGCGAGGGCATCCAGCGCGACAAGCGCGCGCAGTCGATCATCGACGACGAGCTCAAGCGCTACCGGCTCGACCTCAACGACCAGCTGCGCATCGTCGAGAACGACGCGTTCTCGCGCATCGAGCGCCTGCTGGTGGGCAAGGTCGCCAACGGCGGCCCGAAGAAGCTGGCCCGCGGCGCGACCGTCACCGCCGAATACCTCGCCGACCTCGACCGCTACCACTGGTTCGAGGTGCGCCTGGCCGACGAGGCAGCCGCCAACCAGCTCGAGGCACTCAAGGAGTCGATCGAGCAGAAGCGCCACCAGTTCGACCTGGCGTTCGAGGAGAAGCGCAAGAAGCTCACGCAGGGCGACGAGCTGCCTCCGGGCGTGCTGAAGATGGTCAAGGTCTACCTGGCCGTGAAGCGGCGCCTGCAGCCCGGCGACAAGATGGCGGGGCGGCACGGCAACAAGGGCGTGGTCTCGCGCATCGTGCCGGTCGAGGACATGCCGTACATGGCCGACGGCACGCCGGTCGACATCGTGCTCAACCCGCTCGGCGTGCCGTCGCGGATGAACGTGGGCCAGATCCTGGAGACGCACCTCGGCTGGGCAGCCAAGGGCATCGGCCAGCGCATCGGCCGGATGATCGAGCGCAAGGCGCGGGCCGACGAGCTGCGCAAGCTGTTCGACCGCATCTACGACGGCAACGGCCAGCGCGTCGAGGTCGCGCAGCTCGCCGACGACGAGGTGCTCGAGCTCGGGCGCAACCTGGCGAGCGGCGTGCCGTTCGCCACCCCGGTGTTCGACGGCGCCTCCGAGTCCGAGATCAGGCGGATGCTCGACCTCGCGTATCCCGACGACGAGCAGCGCACGAAGCTGATCGGCTTCACGCCGTCGAAGACGCAGGTCACGCTGTACGACGGGCGCACCGGCGACGCGTTCGACCGCACCGTCACCGTCGGCTACATGCACATGCTGAAACTGCACCACCTGGTCGACGACAAGATGCACGCGCGCTCCACGGGCCCGTACTCGCTCGTCACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGCGGCCAGCGCTTCGGCGAGATGGAGGTCTGGGCGCTCGAGGCCTACGGCGCCTCGTACATGCTCCAGGAGATGCTCACCGTCAAGTCCGACGACGTGAACGGTCGCACCAAGGTGTACGAGAACCTGGTCAAGGGCGAGCACGCAATCGACGCCGGCATGCCGGAGTCGTTCAACGTGCTGGTCAAGGAGATCCGCTCGCTCGGCATCGACATCGACCTCGAGCGCAACTGA
PROTEIN sequence
Length: 1351
MATPSQYSFTEKKRIRKSFAKRRVVLDVPQADVAPEARAPEGLQAAFGSIFPIVSHNEFARLEFVNYALGNAPFDVKECQQRGLTFCAPLRAKVRLVIMDREAAKPTVKEVKEQEVYMGEIPLMTTTGSFIVNGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKSIGLTPEQILAHFFVFDSFRLMNEGAQLELVPERLRGEIARFDLVDRDGKVIVAKDKRINAKHIRDMEAAGMKHVSVPEDYLLGRTLAHNVVDAETGEIVAKANDELTEELLKKLRAANVREIRAIYTNDLDQGPYISQTLRIDETADQMAARIAIYRMMRPGEPPTEDAVEALFNRLFYSEDAYDLSKVGRMKFNRRVAREELTGPMTLTNEDILAVIKILVDLRNGKGEIDDIDHLGNRRVRCVGELAENQFRAGLVRVERAVKERLGQAETENLMPHDLINSKPISSQLSQFMDQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSLYARLNEYGFLETPYRKVVDNRVTDEIHYLSAIEEGRYVIAQANAAVDENGRLTGDLVSVRKAGESELTSPEHVQYMDVAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKPLVGTGIERTCAVDSGTVVAALRGGVVDYVDADRIVVRVNDAEAAAGEVGVDIYNLIKYTRSNQNTNINQRPIVRKGDVIARGDVIADGASTDLGELALGQNMLVAFMPWNGYNFEDSILISEKVVADDRYTSIHIEELSVLARDTKLGPEEITRDISNLSESQLGRLDDSGIVYIGAEVQAGDTLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIQRDKRAQSIIDDELKRYRLDLNDQLRIVENDAFSRIERLLVGKVANGGPKKLARGATVTAEYLADLDRYHWFEVRLADEAAANQLEALKESIEQKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSRIVPVEDMPYMADGTPVDIVLNPLGVPSRMNVGQILETHLGWAAKGIGQRIGRMIERKARADELRKLFDRIYDGNGQRVEVAQLADDEVLELGRNLASGVPFATPVFDGASESEIRRMLDLAYPDDEQRTKLIGFTPSKTQVTLYDGRTGDAFDRTVTVGYMHMLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYMLQEMLTVKSDDVNGRTKVYENLVKGEHAIDAGMPESFNVLVKEIRSLGIDIDLERN*