ggKbase home page

cn_combo_scaffold_10046_9

Organism: CN-SCN_Lautropia_89x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 8270..11842

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 999.99
  • Bit_score: 2053
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RZ06_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 999.99
  • Bit_score: 2053
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 999.99
  • Bit_score: 2037
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lautropia mirabilis → Lautropia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3573
ATGAAAGCATTGCTCGACCTGTTCAAGCAGGTCCAGGAAGAAGAGCACTTCGACGCGATCAAGATCGGCCTCGCCTCGCCCGAGAAGATCCGCTCGTGGTCGTTCGGCGAGGTCAAGAAGCCCGAGACGATCAACTACCGCACCTTCAAGCCCGAGCGCGACGGCCTGTTCTGCGCGAAGATCTTCGGGCCGATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTGAAGCACCGCGGCGTCATCTGCGAGAAGTGCGGCGTCGAGGTCACGCTGGCCAAGGTGCGCCGCGAGCGCATGGGACACATCGAGCTCGCCAGCCCGGTCGCGCACATCTGGTTCCTCAAGAGCCTGCCCAGCCGCCTGGGCATGGTGCTCGACATGACGCTGCGCGACATCGAGCGCGTGCTCTACTTCGAGGCGTTCGTCGTCATCGAGCCGGGCATGACGCCGCTCAAGCGCGGCCAGATCATGACCGAGGACGACTTCATCGCGAAGACCGAGGAATACGGCGACGAGTTCCGCGCGATGATGGGCGCCGAGGGCGTGCGCGAGTTGCTGCGCACGATCGACATCGACCGCGACATCGAGCACCTGCGCAAGGAACTCGAGACCACCGGCTCGGAAGCGAAGATCAAGAAGATCGCCAAGCGGCTGAAGGTACTCGAGGGCTTCCAGCGCTCGGGCATCAAGCCCGACTGGATGGTCATGGAGGTGCTGCCGGTGCTGCCGCCCGAGCTGCGCCCGCTGGTGCCGCTCGACGGCGGCCGCTTCGCCACTTCCGACCTCAACGACCTGTACCGGCGCGTCATCAACCGCAACAACCGCCTCAAGCGCCTGCTCGAGCTCAAGGCGCCCGAGATCATCGTGCGCAACGAGAAGCGGATGCTGCAGGAGTCGGTCGACTCGCTGCTCGACAACGGCCGCCGCGGCAAGGCGATGACGGGCGCGAACAAGCGCGCGCTGAAGTCGCTCGCCGACATGATCAAGGGCAAGGGCGGGCGCTTCCGCCAGAACCTGCTCGGCAAGCGCGTCGACTACTCGGGCCGCTCGGTCATCGTGGTCGGCCCGCAGCTCAAGCTGCACCAGTGCGGCCTGCCGAAGCTGATGGCGCTCGAGCTGTTCAAGCCGTTCATCTTCAACAAGCTCGAGACGATGGGCGTGGCAACGACCATCAAGCAGGCGAAGAAGTACGTCGAGAGCCAGGAACCGATCGTCTGGGACATCCTAGAAGAGGTGATCCGCGAGCACCCGGTGCTCCTGAACCGGGCGCCGACGCTGCACCGCCTCGGCATCCAGGCGTTCGAGCCGGTGCTGATCGAAGGCAAGGCGATCCAGCTGCACCCGCTGGTGTGCGCGGCGTTCAACGCCGACTTCGACGGTGACCAGATGGCCGTGCACGTGCCGCTGTCGCTCGAGGCGCAGCTCGAGGCGCGCGCGCTGATGCTCGCCTCGAACAACGTGCTGTTCCCGTCCAACGGCGAGCCGTCGATCGTGCCGTCGCAGGACATCGTGCTGGGCCTGTACTACACCACGCGCGAGAAGGTCAACGGCAAGGGCGAGGGAATGTTCTTTGCCGACGTCGGCGAAGTGCAGCGCGCCTATGACAACGGCCAGGTCGAACTGGGCACGAAGATCGTCGTGCGGCTGGTCGAATACACCAAGGATCGCGAGAGCGGCGAAGTCGAGCCGCGCCCGATCCGCGCCCAGACCACCGTCGGCCGCGCGCTGCTCTCGGAAATCCTCCCCAAGGGGCTGCCGTTCGACCTGCTCAACCGCGCCCTGAAGAAGAAGGAGATCTCGCGGCTGATCAACGCCTCGTACCGGCGCTGCGGCCTGCGCGACACGGTCATCTTCGCCGACCAGCTGATGCAGAACGGCTTCAAGCTGGCCACCCGCGCGGGCCTCTCGATCGCGATCGACGACATGCTGGTGCCGACCCAGAAGACCGACATCCTCGCCCAGGCCGAAAAGGAGGTGAAGGAGATCGAGCAGCAGTACACCTCGGGCCTGGTCACCCACGGCGAGCGCTACAACAAGGTGGTCGACATCTGGGGCCGCGCCGGCGACGACGTCGGCAAGGCGATGATGCGCCAGCTCGAGACGCAGAACGCCGTCGACCGCTCGGGCAACACCGTCAGGCAGGAGTCGTTCAACTCCATCTACATGATGGCCGACTCGGGCGCGCGCGGCTCGGCCGCGCAGATCCGGCAGCTCGCGGGCATGCGCGGCCTGATGGCCAAGCCCGACGGCTCGATCATCGAGACGCCGATCACCGCGAACTTCCGCGAGGGCCTGAACGTCCTGCAGTACTTCATCTCGACGCACGGCGCGCGCAAGGGCCTGGCCGACACCGCGCTGAAGACCGCGAACTCGGGCTACCTCACGCGGCGCCTGGTCGACGTGACGCAGGACCTGGTCGTCACCGAGGACGACTGCGGCACCACCAACGGCGTGTCGATGAAGGCGCTGATCGAGGGCGGCGAGGTGATCGAGGCGCTGCGCGACCGCATCCTCGGGCGCGTGGCCGCCGTCGACGTGATCCATCCCGAGACGCAGGAGACGGTGTTCGACGCCGGCACGCTGCTCGACGAGGACGCGGTCGACGAGATCGTGCGGCTGGGCATCGACGAGGTGCGCGTGCGCACCCCGCTCACCTGCGCGACGCGCTACGGGCTGTGCGCCAAGTGCTACGGGCGCGACCTCGGCCGCGGTTCGCTGGTGAACAGCGGCGAGGCCGTCGGGGTGATCGCTGCGCAGTCGATCGGCGAGCCCGGCACGCAGCTCACGATGCGCACTTTCCACATCGGCGGCGCGGCATCGCGCGCTGCGGTCGCCAGCGCGGTCGAGGCGCGCTCGAACGGAGTCGTGCGCTTCACCGCGACGATGCGCTACGTCAGCAACGCGAAGGGCGAGCAGATCGTCATCTCGCGCTCGGGCGAGGTCACGATCGTCGACGACAACGGCCGCGAACGCGAGCGCCACAAGGTGCCGTACGGCGCCACGCTGCTTGCCATCGACGGCAAGGCGGTGAAGGCGGGCACGCAGCTGGCCACCTGGGATCCGCTCACGCGGCCGATCATCACCGAGTACCCGGGCACGATCCGCTTCGAGAACGTCGAGGAGGGCGTCACCGTCGCCCGGCAGATCGACGAGATCACCGGCCTGTCCACGCTGGTCGTGATCGACGCCAAGCGCCGCGGAACGACCGCGAGGTCGGTCCGCCCGCAGGTCAAGCTGATCGACGAGGCGGGCGAGGAAGTCCGCATCGCGAACACCGACCACGCGGTCACGATCGGCTTCCCGGTGGGTGCGCTGATCACCGTGCGCGACGGCCAGCAGGTCGGCGTCGGGGAGATCCTGGCACGCATTCCGCTCGAGTCGCAGAAGACGCGCGACATCACCGGCGGCCTGCCGCGGGTGGCCGAACTGTTCGAGGCGCGCTCGCCGAAGGACGCCGGGATGCTCGCCGAAGTCACCGGCACCGTGTCGTTCGGCAAGGACACCAAGGGCAAGCAGCGGCTGGTCATCACCGACCTCGACGGCAACGCCCACGAGTTCCTGATC
PROTEIN sequence
Length: 1191
MKALLDLFKQVQEEEHFDAIKIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAFVVIEPGMTPLKRGQIMTEDDFIAKTEEYGDEFRAMMGAEGVRELLRTIDIDRDIEHLRKELETTGSEAKIKKIAKRLKVLEGFQRSGIKPDWMVMEVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQESVDSLLDNGRRGKAMTGANKRALKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFIFNKLETMGVATTIKQAKKYVESQEPIVWDILEEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLEARALMLASNNVLFPSNGEPSIVPSQDIVLGLYYTTREKVNGKGEGMFFADVGEVQRAYDNGQVELGTKIVVRLVEYTKDRESGEVEPRPIRAQTTVGRALLSEILPKGLPFDLLNRALKKKEISRLINASYRRCGLRDTVIFADQLMQNGFKLATRAGLSIAIDDMLVPTQKTDILAQAEKEVKEIEQQYTSGLVTHGERYNKVVDIWGRAGDDVGKAMMRQLETQNAVDRSGNTVRQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVTEDDCGTTNGVSMKALIEGGEVIEALRDRILGRVAAVDVIHPETQETVFDAGTLLDEDAVDEIVRLGIDEVRVRTPLTCATRYGLCAKCYGRDLGRGSLVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASAVEARSNGVVRFTATMRYVSNAKGEQIVISRSGEVTIVDDNGRERERHKVPYGATLLAIDGKAVKAGTQLATWDPLTRPIITEYPGTIRFENVEEGVTVARQIDEITGLSTLVVIDAKRRGTTARSVRPQVKLIDEAGEEVRIANTDHAVTIGFPVGALITVRDGQQVGVGEILARIPLESQKTRDITGGLPRVAELFEARSPKDAGMLAEVTGTVSFGKDTKGKQRLVITDLDGNAHEFLI