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cn_combo_scaffold_1577

Alias: CYT12_24

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1577_1
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(171..1646)
-----------------
DNA (1476bp)
protein (492aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J457_CYCMS
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEL27483.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobac
cn_combo_scaffold_1577_2
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1682..3181)
-----------------
DNA (1500bp)
protein (500aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J2Z5_CYCMS
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEL27482.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobac
cn_combo_scaffold_1577_3
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3298..4878)
-----------------
DNA (1581bp)
protein (527aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZS81_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EON76965.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacte
hypothetical protein rbh
cn_combo_scaffold_1577_4
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4967..6601)
-----------------
DNA (1635bp)
protein (545aa)
Putative nutrient binding outer membrane protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WFM2_9BACT
Putative nutrient binding outer membrane protein {ECO:0000313|EMBL:EPR65544.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cy
hypothetical protein
cn_combo_scaffold_1577_5
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6625..10065)
-----------------
DNA (3441bp)
protein (1147aa)
TonB-dependent receptor n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7V5T8_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:EPR65545.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-
putative outer membrane protein
cn_combo_scaffold_1577_6
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10261..11307)
-----------------
DNA (1047bp)
protein (349aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035F7429
FecR anti-FecI sigma factor
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ACT93428.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strai
cn_combo_scaffold_1577_7
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11330..11884)
-----------------
DNA (555bp)
protein (185aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003658CD9
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEI51226.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithy
cn_combo_scaffold_1577_8
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12033..12623)
-----------------
DNA (591bp)
protein (197aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035C259F
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEI47427.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithy
cn_combo_scaffold_1577_9
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12774..13796
-----------------
DNA (1023bp)
protein (341aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003752937
FecR anti-FecI sigma factor
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ACT92669.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strai
cn_combo_scaffold_1577_10
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14019..17375
-----------------
DNA (3357bp)
protein (1119aa)
Putative uncharacterized protein n=1 Tax=Bacteroides dorei DSM 17855 RepID=B6W1B3_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB24244.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM
TonB-dependent receptor plug
cn_combo_scaffold_1577_11
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17386..19020
-----------------
DNA (1635bp)
protein (545aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000368E658
Uncharacterized protein {ECO:0000313|EMBL:KKB56534.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldste
RagB/SusD domain-containing protein
cn_combo_scaffold_1577_12
RLO_PLX_64_10, Bacteria

Not on your lists

19031..20545
-----------------
DNA (1515bp)
protein (505aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0DF55_SINAD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
cn_combo_scaffold_1577_13
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20619..23687
-----------------
DNA (3069bp)
protein (1023aa)
Membrane-bound dehydrogenase domain protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J0K9_CYCMS
membrane-bound dehydrogenase domain-containing protein
Membrane-bound dehydrogenase domain protein {ECO:0000313|EMBL:AEL23925.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium
cn_combo_scaffold_1577_14
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23799..26120
-----------------
DNA (2322bp)
protein (774aa)
Uncharacterized protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WRF0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EPR69309.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-
hypothetical protein
cn_combo_scaffold_1577_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

26365..27765
-----------------
DNA (1401bp)
protein (467aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHL4_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28176.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
cn_combo_scaffold_1577_16
unknown

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27859..29391
-----------------
DNA (1533bp)
protein (511aa)

This feature has no annotations

cn_combo_scaffold_1577_17
unknown

Not on your lists

comp(29415..29780)
-----------------
DNA (366bp)
protein (122aa)

This feature has no annotations

cn_combo_scaffold_1577_18
Flexithrix dorotheae, Flexithrix, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29901..30812)
-----------------
DNA (912bp)
protein (304aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003731000
hypothetical protein
cn_combo_scaffold_1577_19
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

31190..32623
-----------------
DNA (1434bp)
protein (478aa)
L-alanine-DL-glutamate epimerase n=1 Tax=Dyadobacter beijingensis RepID=UPI000378AD80
L-alanine-DL-glutamate epimerase-like protein
L-alanine-DL-glutamate epimerase-like protein {ECO:0000313|EMBL:ACT92519.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter
cn_combo_scaffold_1577_20
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32668..32811)
-----------------
DNA (144bp)
protein (48aa)
Biotin carboxylase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NWA7_9BACT
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:AHM59432.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgac
acetyl-CoA carboxylase, biotin carboxylase
cn_combo_scaffold_1577_21
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32863..33975)
-----------------
DNA (1113bp)
protein (371aa)
acetyl-CoA carboxylase (EC:6.4.1.2)
Acetyl-CoA carboxylase {ECO:0000313|EMBL:AKD57929.1}; EC=6.4.1.2 {ECO:0000313|EMBL:AKD57929.1};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" s
acetyl-CoA carboxylase subunit alpha n=1 Tax=Rudanella lutea RepID=UPI00036E61C4
cn_combo_scaffold_1577_22
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34040..34525)
-----------------
DNA (486bp)
protein (162aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K4A8_9BACT
acetyl-CoA carboxylase, biotin carboxyl carrier protein
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:CCG98961.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibr
cn_combo_scaffold_1577_23
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34632..35165)
-----------------
DNA (534bp)
protein (178aa)
elongation factor P n=1 Tax=Dyadobacter beijingensis RepID=UPI00037763CE
translation elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacte
cn_combo_scaffold_1577_24
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(35259..36248)
-----------------
DNA (990bp)
protein (330aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGI3_RUNSL
3-oxoacyl-ACP synthase
cn_combo_scaffold_1577_25
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(36285..37223)
-----------------
DNA (939bp)
protein (313aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
phosphate acyltransferase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003628401
fatty acid/phospholipid synthesis protein PlsX
cn_combo_scaffold_1577_26
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(37559..38092)
-----------------
DNA (534bp)
protein (178aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W030_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95357.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
cn_combo_scaffold_1577_27
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(38226..38858)
-----------------
DNA (633bp)
protein (211aa)
Acetyltransferase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W031_DYAFD
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:ACT95358.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 7008
cn_combo_scaffold_1577_28
Capnocytophaga sp. oral taxon 329, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38956..39375)
-----------------
DNA (420bp)
protein (140aa)
Toxin-antitoxin system toxin component, PIN family n=1 Tax=Capnocytophaga sp. oral taxon 329 str. F0087 RepID=F3XQR2_9FLAO
Toxin-antitoxin system toxin component, PIN family {ECO:0000313|EMBL:KHE68252.1}; TaxID=706436 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;"
putative toxin-antitoxin system toxin component, PIN family
cn_combo_scaffold_1577_29
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39356..39586)
-----------------
DNA (231bp)
protein (77aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L010_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE52719.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobact
cn_combo_scaffold_1577_30
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(39711..40457)
-----------------
DNA (747bp)
protein (249aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W032_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95359.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
Displaying items 1-30 of 35 in total

View Taxonomy