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cn_combo_scaffold_1693

Alias: CYT12_27

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1693_1
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

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214..804
-----------------
DNA (591bp)
protein (197aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003752091
two component transcriptional regulator, LuxR family Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
two-component response regulator protein
cn_combo_scaffold_1693_2
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1280..2872
-----------------
DNA (1593bp)
protein (531aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000368A8A5
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADZ80734.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sph
cn_combo_scaffold_1693_trna_1
unknown

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comp(3121..3204)
-----------------
DNA (84bp)
transferRNA
cn_combo_scaffold_1693_3
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3310..4626)
-----------------
DNA (1317bp)
protein (439aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VWP7_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96797.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
cn_combo_scaffold_1693_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4673..5977
-----------------
DNA (1305bp)
protein (435aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000361D0F1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96798.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
cn_combo_scaffold_1693_5
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5974..6603)
-----------------
DNA (630bp)
protein (210aa)
Beta-phosphoglucomutase {ECO:0000313|EMBL:EON75618.1}; EC=5.4.2.6 {ECO:0000313|EMBL:EON75618.1};; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassif
Beta-phosphoglucomutase n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZNI6_9BACT
HAD-superfamily hydrolase
cn_combo_scaffold_1693_6
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(6653..7195)
-----------------
DNA (543bp)
protein (181aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037EFA31
redoxin domain-containing protein
Redoxin domain protein {ECO:0000313|EMBL:ACT94123.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter ferm
cn_combo_scaffold_1693_7
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7310..7633
-----------------
DNA (324bp)
protein (108aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W5S8_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96017.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
cn_combo_scaffold_1693_8
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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7829..9742
-----------------
DNA (1914bp)
protein (638aa)
molecular chaperone DnaK n=1 Tax=Dyadobacter beijingensis RepID=UPI000377743C
dnaK; molecular chaperone DnaK
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
cn_combo_scaffold_1693_9
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9831..10847)
-----------------
DNA (1017bp)
protein (339aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000378D582
Uncharacterized protein {ECO:0000313|EMBL:KKB60181.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldste
hypothetical protein
cn_combo_scaffold_1693_10
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10822..12633)
-----------------
DNA (1812bp)
protein (604aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036BCABD
Uncharacterized protein {ECO:0000313|EMBL:EOS17420.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldst
RagB/SusD domain-containing protein
cn_combo_scaffold_1693_11
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12645..15539)
-----------------
DNA (2895bp)
protein (965aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003801BBD
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:KKB60183.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" sou
TonB-dependent Receptor Plug Domain./TonB dependent receptor.
cn_combo_scaffold_1693_12
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15727..17535)
-----------------
DNA (1809bp)
protein (603aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035D737C
Uncharacterized protein {ECO:0000313|EMBL:EOS17422.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldst
SusD/RagB family lipoprotein
cn_combo_scaffold_1693_13
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17548..20772)
-----------------
DNA (3225bp)
protein (1075aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003659EC9
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EOS17423.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" so
TonB-dependent Receptor
cn_combo_scaffold_1693_14
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(21103..21891)
-----------------
DNA (789bp)
protein (263aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-R
Type III pantothenate kinase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W016_DYAFD
putative Baf family transcriptional acitvator
cn_combo_scaffold_1693_15
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21940..22782)
-----------------
DNA (843bp)
protein (281aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cy
ACP S-malonyltransferase n=1 Tax=Dyadobacter beijingensis RepID=UPI00037E6D88
malonyl CoA-acyl carrier protein transacylase
cn_combo_scaffold_1693_16
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23088..26450)
-----------------
DNA (3363bp)
protein (1121aa)
OmpA-related protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W7S8_DYAFD
OmpA-like protein
OmpA-related protein {ECO:0000313|EMBL:ACT96272.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermen
cn_combo_scaffold_1693_17
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26730..27452
-----------------
DNA (723bp)
protein (241aa)
Alpha/beta hydrolase fold protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W7S7_DYAFD
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ACT96271.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (
cn_combo_scaffold_1693_18
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27478..28200)
-----------------
DNA (723bp)
protein (241aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279,
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003799485
pyridoxine 5'-phosphate synthase
cn_combo_scaffold_1693_19
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28370..28777
-----------------
DNA (408bp)
protein (136aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4V6_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95930.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
cn_combo_scaffold_1693_20
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28806..29345
-----------------
DNA (540bp)
protein (180aa)
Colicin V production protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4V7_DYAFD
colicin V production protein
Colicin V production protein {ECO:0000313|EMBL:ACT95931.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strai
cn_combo_scaffold_1693_21
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29357..30412
-----------------
DNA (1056bp)
protein (352aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HA
50S rRNA methyltransferase n=1 Tax=Dyadobacter beijingensis RepID=UPI00036C0F32
radical SAM enzyme, Cfr family
cn_combo_scaffold_1693_22
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30514..31356
-----------------
DNA (843bp)
protein (281aa)
Phosphate transporter n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4V9_DYAFD
phosphate transporter
Phosphate transporter {ECO:0000313|EMBL:ACT95933.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC
Displaying 23 items

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