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cn_combo_scaffold_233_12

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(10081..12774)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor plug n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EAG0_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 806.0
  • Bit_score: 1044
  • Evalue 0.0
TonB-dependent receptor plug {ECO:0000313|EMBL:AEI48064.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithy similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 806.0
  • Bit_score: 1044
  • Evalue 0.0
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 806.0
  • Bit_score: 1044
  • Evalue 0.0

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2694
ATGACGAGACTCCGGGGCTGGGACGCCCCCAATTCCCGCCACGCGGCCTGGGGTGTCAAGTTCCGCATCACGCCTTCCGAGCGGTTCGACGGAGCCCCCTTCGCGTCCCATGCCACGAGGGGCGCTCGCCATCCGGCACCCCGGCGACCGCCCATCCCGCACCCGCTTGTCGCCCCTGCGACGCCCCGCGAACTTGCCAGCGCACCGCGATGCGCCCCGACGGACCTCACACGGGCGTTCTCCATACACGCCTCGAGCCCAACCCTTCCCCGTACCGTGCCACTCCGCGTCCTTCGTTGGTTTCTCTGCTCGCTCTGCCTCCCGCTAGCCGTTGCCGCCCAGACGCCGTCGGGCGTCACCCTCTCGGGCAGACTCCAGGACGCCGAGTCGAAGGCGCCGCTCCCCTACCTCTCGCTTCAGCTCGTGGCGGAGAAGGACAGCGCGTTCGTCGCAGGAGGGCTGACCGACCAGGAGGGCGCCTTCACCTTCGCGGCGCTCAAGAAGGGGGTATACGTCCTGGTGGCCCGGTCGATCGGCTACCAGCCCCTCCGACAGCGCGTCCTGATCGGTGAGCTGAGTCCCTTCCTCGACCTCGGCCCCATCGCGATGACCCGGTCGCCGCAGGCGCTGGCCGGCGTCGTCGTCACGGGGAGCGCCGATGCCGTCTCCGCGGCCATGGACCGCAAGAGCTTCACCGTCGCCGACAACATCAGTCAGTCGGGCGGTTCCGTCCTCCAGGCCATGAGCGCCGTGCCGGGGGTGACCGTCGGACAGGACGGCAAGATTCTCCTCCGCGGCAGCGACAAGGTCGTCGTCCTCATCGACGGCAAGCAGACCGCACTCACCGGCTTCGGCTCGCAAGCCGGCCTGGACAACCTCCCCGCGTCGGCGCTCGAGCGCATCGACGTCATCAACAATCCGTCGGCCAAGTTCGATGCCAACGCCAGCGCCGGTATCATCAACCTCGTTTTCCGCAAGGAGGAACAGCGCGGCTTCAACGGCAAGCTGGGCGTGATGGGCGGTGCGGGCGCGCTGTGGGAGAAGAAGGCGAACCTCCCCACCATCCGCCCACAGTACCAGGGCACGCCCAAGTTCAACCCCTCGGTCGGCGTCAACTACCGCAACGGCAAGACCAACTCCTTCCTGCAGGCCGACTGGCTCTATTCCCCGACGCTCAACAAGAACGAGTTCGCCACCCGCACCTACGACGACGGCACCGTCATCGTCCAACAGGTCAAGCGCAACCGCCGCACCGACTACGCCACCCTCAACGCGGGGGTGGACCACGCCATCGATGAGCGCAACACGCTCCACGTCGCCGGGCTGTTCAACCGCGAGAAGATCCTCGACTACGGCGACAACCCGTACTTCGACCAGACGTTGCAGACCCGCTTGCGCCTGTGGCAGTTCCTGGAGGACGAGGTCAAGTACACCGCGTTCGGCACCGCCTCGCTGGTGCACAGGTTCCCGCAGGCCGGGCACACGCTGACCTTCACCAGCAATTACTCCTTCCACCGCGAGGACGAGCAGTACTTCTTCACCAACACGCTCCCTTCCTTCACGGGGCGCGACGCGTTCAAGCTGCTCTCCGACGAGCACGTCGTGGACCTCAACGCCGACTACGTCAAGCCGCTCCGGCAGGGGCGTCTGGAGGCGGGGTTCAAGGGGCGCTACCGCTCCATCCCGGTGAACATGCGCTTCTTCCCGGGCCAGAACTCTCCCATCGACACGGGAGCCGGCGGCTGGGCGACCTACCGCGAGACCATTCCCGCCGTGTACGGCAACTACGTCTTCGAGAGCGAGCACGTGGAGCTCGAAGGGGGAGTCCGCATCGAGGCCGTGCACGTCGACTACGACGTCAACCCGGGCCATAACACCTACAAGAGCGACGGCTATCGGTATTTCCGGCCGTTCCCCAACCTGCGCGCCGCCTGGAAGTTCGACGACGCCAACAAGCTGTCGCTCTTCTTCAACCGGCGCGTCGATCGCCCCAATGAGGTCGACATCCGCATCTTCCCCAAGTACGACGAGCCGGAGCTGATCAAGGTCGGCAACCCCGGGCTCCAGCCGCAGTATGCCACCTCCATGGAACTCGGCTACAAGACGAGCTGGGCAACGGGGAGCCTGTACACCGCCGCCTATCACCGCATCGTCGACGGCACGATCACCCGCATCGCCACGCAGCCTCCTGGCAGCGTGCTCCTGTACAACGTCTTCCAGAACGCCGGGCGCAGCTGGAGCACTGGGGGCGAAGTGGTCTGGCAGCAGTTGGTCGGGGCGCAGCTCTCGCTCAACGCCAATGCCAACGTCTACCGCCGCATCATCGACGCGTTCTCGGTCGTGAACCGCTACCCGGTCCCGGTAACGTACACGGCGTCGCGCGAGCAGCTCACATCGGGCAACGTCAAGCTCAACGCGACGCTCACCCTTCCACGCGACTGGCAGTTGCAGCTCTCCAACATCTACCTCGCCCCCGATCTCTTCCCGCAGGGGCGCATGGGGAGCCGCTACCTCCTCGACGCCGGCGCGAAGAAGAGCGTTCTGCGAGGGAGGGGCGAGATCGTCGTGAACGCCACCGATCTGCTCAACACCAACCAGGTCGAGCGTACCATCCGCGGCACCAACTTTCGCCTCGTCAGCACGGACTACCTGGAGACGCAGGTCATTCGTGTGGGCTACAACTGGAAGTTCTAG
PROTEIN sequence
Length: 898
MTRLRGWDAPNSRHAAWGVKFRITPSERFDGAPFASHATRGARHPAPRRPPIPHPLVAPATPRELASAPRCAPTDLTRAFSIHASSPTLPRTVPLRVLRWFLCSLCLPLAVAAQTPSGVTLSGRLQDAESKAPLPYLSLQLVAEKDSAFVAGGLTDQEGAFTFAALKKGVYVLVARSIGYQPLRQRVLIGELSPFLDLGPIAMTRSPQALAGVVVTGSADAVSAAMDRKSFTVADNISQSGGSVLQAMSAVPGVTVGQDGKILLRGSDKVVVLIDGKQTALTGFGSQAGLDNLPASALERIDVINNPSAKFDANASAGIINLVFRKEEQRGFNGKLGVMGGAGALWEKKANLPTIRPQYQGTPKFNPSVGVNYRNGKTNSFLQADWLYSPTLNKNEFATRTYDDGTVIVQQVKRNRRTDYATLNAGVDHAIDERNTLHVAGLFNREKILDYGDNPYFDQTLQTRLRLWQFLEDEVKYTAFGTASLVHRFPQAGHTLTFTSNYSFHREDEQYFFTNTLPSFTGRDAFKLLSDEHVVDLNADYVKPLRQGRLEAGFKGRYRSIPVNMRFFPGQNSPIDTGAGGWATYRETIPAVYGNYVFESEHVELEGGVRIEAVHVDYDVNPGHNTYKSDGYRYFRPFPNLRAAWKFDDANKLSLFFNRRVDRPNEVDIRIFPKYDEPELIKVGNPGLQPQYATSMELGYKTSWATGSLYTAAYHRIVDGTITRIATQPPGSVLLYNVFQNAGRSWSTGGEVVWQQLVGAQLSLNANANVYRRIIDAFSVVNRYPVPVTYTASREQLTSGNVKLNATLTLPRDWQLQLSNIYLAPDLFPQGRMGSRYLLDAGAKKSVLRGRGEIVVNATDLLNTNQVERTIRGTNFRLVSTDYLETQVIRVGYNWKF*