ggKbase home page

Ig9238_scaffold_94854_10

Organism: Ig9238_Hor_167_2016_Gammaproteobacteria_66_20

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(9010..12258)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 1066.0
  • Bit_score: 1056
  • Evalue 0.0
Ribonuclease E Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTQ4_PSEUU similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 1134.0
  • Bit_score: 1038
  • Evalue 0.0
ribonuclease, Rne/Rng family similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 1134.0
  • Bit_score: 1038
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter arseniciresistens → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3249
ATGAAGCGAATGCTGATCAACGCGACTCAGAAAGAAGAGTTGCGACTGGCCATCGTCGATGGCCAGAGCCTGTACGACATCGATATCGAACAGGCGTCCCGGGAACAGACCAAGTCCAACATCTACAAGGGCCGGATCACCCGGCTGGAGCCGTCTTTGGAGGCGGCCTTTGTCGAGTTTGGCGGCGAGCGGCACGGTTTCCTGCCGCTCAAGGAGATCTCCTCGGACTACTTCGCCCAGGGCGTCGATCCGGCCAAGGCCGGCATCAAGGACCTGCTGCGCGAAGGCCAGGAAGTCGTCGTCCAGATCGACAAGGAGCAGCGCGGCAGCAAGGGGGCGGCGCTGACCACCTTCATCTCGCTGGCCGGCCGCTACATGGTGCTGATGCCCAACAGCCCCAGCGCCGGCGGCGTATCCCGGCGGATCGAGGGCGACGACCGCCAGGCGCTGAAGCAGGCGATGGACCAGTTGTCCATCCCCGACGACATGGCGATCATCATCCGCACCGCCGGCGTCGGCCGCGACGCCGACGAACTGCAGTGGGATATGGACTACCTGATGCAGGTCTGGCGCGCGATCACCGACGCCGCCCTGGCCAAGCCGGCGCCGTTCCTGATCTACCAGGAATCCAGGCTCATCATCCGCGCACTGCGCGACTATCTGCGCGCCGACATCGGCGAGATCCTGGTCGACACCGAGGAGATGTACGCCGAGGCCCAGGAGTTCATGCAGCAGGTGATGCCGAGCAATCTGCGCAAGCTCAAGCTCTACACGGACACCACGCCGCTGTTCAACCGCTATCAGATCGAATCGCAGATCGAGAATGCCTATGAACGGGAGGTGCGGCTGCCCTCGGGCGGCGCCATCGTAGTCGACCAGACCGAGGCGCTGACCGCCATCGACGTCAATTCGGCGCGCGCCACCAAGGGCGGCGACATCGAGGAAACCGCCTACCGCACCAACCTGGAAGCGGCCGACGAAGTGGCCCGCCAGCTGCGCCTGCGCGATCTGGGCGGCCTGGTGGTGATCGACTTCATCGACATGTCCTCGAGCAAGAACCAGCGCGAGGTCGAGGACCGTCTCAAGCAGGCGCTCAAGCAGGACCGGGCCCGGGTTCAGATCGGCCGGATCTCGCGCTTCGGCCTGCTCGAGATGAGCCGCCAGCGTCTGCGCCCCAGCCTGGGCGAGTCGACCCAGATCGTCTGCCCGCGCTGCGAAGGCCACGGCCGCATGCGCAGCGTCGAGTCGCTGTCGCTGTCGATCCTGCGGCTGGCCGAAGAGCAGGCCATGAAGGAAAACACCGCCCAGGTGTTGGTGCAGGCGCCGCCGGAAATCGGCAACTATCTGCTCAACGAAAAGCGCCGCGCACTGCTGGAAATAGAACAGCGCCACAACGCGCCGGTGGTGGTGGTGGCCGACCCGCAGCTGGAGACGCCGCATTTCAACGTCAATCGTCTGCGCGAAGGCGAGCTGGCCGAGGAGTCCAGCAAGCCCAGCTACCAGCGCACCACGCCGCGCCGGCTGCAGACCCACTCGCTGACCCGCGACAACCTCAATATCCCACCGCCCGCGGTAACCCGGATCGAGCCGGTTCGGCACGCGCCGGTGCGCGAGACTGCCGAGCCAGTCGCTGGGCCGGTTCCGGTGCCGCGGAATTCCAGCGGACTGATCGAGCGCATCATGCGCTGGTTCCGGGGCGCGGCTCCGGCTGAAGACCAGACCCGGGAAGCCCCGGGCAAACGTGATGGCGATGCCCGGCGGGAACGGCCCCAGGCAGGCCAGCGTCGTGATCGTGGCAGACGCGCAGAGTCCAGGCCCGCCGAGGAAGGCAGCGCCCGCAGTGAGCGCCCGAGCAAGGGCGAGCGTGGCGGCAGGAAGGCCAAGGCCGAGGCCCGAGCCGACAGGCCCGCCGACGGCCCGAAGCAGGCTAGGGGCGAGGCTCGTCCAGAACGCGCCAAGGCGGCCGATGCCCGTCCCGGCAAGGACGCGGCACAAGCTGCCGCCAAAGGCGAACGCGCTGCAACGACCAAGCCCACTGGCGACCGCCCCAGCCGAGAAAAAGTCGATCAGGATGCCGTCGAAGCCGTGGTTTCGATCGCTGCGCCCGCGGCCGTCGCAATCAATGCCACCGAGGCGACGCAGGCACCAGGCGCCGGTCAGGTTGACGCAACCGCCGGCTCCGCGTCTGCGGCTGAAGGCGGCCCGGACGTTGGCGACAGCGTCGATGCCAGCGGCAGCCGTCGCCGCCGGGGTCGTCGCGGTGGCCGTCGCCGTCGCCGTGGTGGCGCCGCCGAGGCTGAGTCGGCGCAGACTGCCAATGCCGATGATGGCAACATCAATGAAGGCAACGTCGATGCCCATGGTCAGGGTGCTCAGGATCAGAATGTTCAGCGCCAAGGCGCCCAGGCCAAGCTGCCGCTGAGCAGCCTCCCGCAGCCGCGCAGCGCCAATACCGAACAGCCCAGAACCATCGCAACCGGCGTCGAGGCCCCAGTCGACACCGAGGCTTCCGCGTCGAGTGCATCGGCGCCAGAAGAAGCTAGGCTGGCCGCTGGAACCGCCGATTCGCCGACACAGGCGCCGTCCGATCAGTCATCGCCCAAGCGTGCCCCGCTCGAGCCGGCTTCGCCAGCGCAAGCTTTCCCGGAGCAGGCCGACCGGGATGCTTTACGGCCCGCTGCGGCGACCACGTCAACGGTGGCCGCGATCGATGCCGTGCTCGCCACGCCAAACGACCCCGGCGAGCGTCTGCCCATGGTGATGGCTCCGGCAGCGGTCGAGATTCGACCGGAACCGGTTTCCACGCCAGAAGCCACCGTGGCGGCCACGGTGGAAACAGCGATCGCGACCAGTGAGGCTTCCCGGCAAACCGAACCGGCGATAGCCGTATCGGCACCCGCTTACCCCCAGCCGCCGGCTGCAACGATTCCGGGGCCGCACGCGGTCGTCACCGGCGCGTCCGAACCCGAGCCCAGGCCGGCTGCCAGCGTACCGGCGCCAGCGCCGGCATTCGAGCTGGCCGTCGAACAGCCGACGGCGGCGCAGGCGACTGATCAGGCCGCCTCCGATGGCGATGCCTTCGATGGCGATTCCTTGCGAAAGGCCGAAGCGGAAGCCACGGCGAAACCCGGCGGTTGGACAGTCGAGCCGGCGCCGGAATCCGCGTCCGAAACCAAGGGCGCAGTCGTGCCCAAACCTGCCGACGGAGACGAAGACAGGCGCGAAAGCGCCACCAACGAAGGGCGCTGA
PROTEIN sequence
Length: 1083
MKRMLINATQKEELRLAIVDGQSLYDIDIEQASREQTKSNIYKGRITRLEPSLEAAFVEFGGERHGFLPLKEISSDYFAQGVDPAKAGIKDLLREGQEVVVQIDKEQRGSKGAALTTFISLAGRYMVLMPNSPSAGGVSRRIEGDDRQALKQAMDQLSIPDDMAIIIRTAGVGRDADELQWDMDYLMQVWRAITDAALAKPAPFLIYQESRLIIRALRDYLRADIGEILVDTEEMYAEAQEFMQQVMPSNLRKLKLYTDTTPLFNRYQIESQIENAYEREVRLPSGGAIVVDQTEALTAIDVNSARATKGGDIEETAYRTNLEAADEVARQLRLRDLGGLVVIDFIDMSSSKNQREVEDRLKQALKQDRARVQIGRISRFGLLEMSRQRLRPSLGESTQIVCPRCEGHGRMRSVESLSLSILRLAEEQAMKENTAQVLVQAPPEIGNYLLNEKRRALLEIEQRHNAPVVVVADPQLETPHFNVNRLREGELAEESSKPSYQRTTPRRLQTHSLTRDNLNIPPPAVTRIEPVRHAPVRETAEPVAGPVPVPRNSSGLIERIMRWFRGAAPAEDQTREAPGKRDGDARRERPQAGQRRDRGRRAESRPAEEGSARSERPSKGERGGRKAKAEARADRPADGPKQARGEARPERAKAADARPGKDAAQAAAKGERAATTKPTGDRPSREKVDQDAVEAVVSIAAPAAVAINATEATQAPGAGQVDATAGSASAAEGGPDVGDSVDASGSRRRRGRRGGRRRRRGGAAEAESAQTANADDGNINEGNVDAHGQGAQDQNVQRQGAQAKLPLSSLPQPRSANTEQPRTIATGVEAPVDTEASASSASAPEEARLAAGTADSPTQAPSDQSSPKRAPLEPASPAQAFPEQADRDALRPAAATTSTVAAIDAVLATPNDPGERLPMVMAPAAVEIRPEPVSTPEATVAATVETAIATSEASRQTEPAIAVSAPAYPQPPAATIPGPHAVVTGASEPEPRPAASVPAPAPAFELAVEQPTAAQATDQAASDGDAFDGDSLRKAEAEATAKPGGWTVEPAPESASETKGAVVPKPADGDEDRRESATNEGR*