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cn_combo_scaffold_1815

Alias: MES20_41

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1815_1
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1258
DNA (1257bp) protein (419aa)
ATP-dependent protease n=1 Tax=Hoeflea sp. 108 RepID=UPI00037FD007
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=1082933 species="Bacteria; Proteoba
heat shock protein HslVU, ATPase HslU
cn_combo_scaffold_1815_2
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1425..2384
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036EDACF
Uncharacterized protein {ECO:0000313|EMBL:ESW83628.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
cn_combo_scaffold_1815_3
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2386..2760)
DNA (375bp) protein (125aa)
DNA-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036177BA
Helix-turn-helix family protein {ECO:0000313|EMBL:AID33498.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizob
transcriptional regulator
cn_combo_scaffold_1815_4
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2757..3305)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000376A28D
DNA mismatch repair protein MutS {ECO:0000313|EMBL:ESZ23162.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
Smr protein/MutS2
cn_combo_scaffold_1815_5
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3302..4408)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003676FA4
MltA domain-containing protein {ECO:0000313|EMBL:EHH07180.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizob
outer membrane lipoprotein GNA33, membrane-bound lytic murein transglycosylase
cn_combo_scaffold_1815_6
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4431..5135)
DNA (705bp) protein (235aa)
calcium-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037A5926
Calcium-binding protein {ECO:0000313|EMBL:ESZ10384.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
import inner membrane translocase subunit Tim44
cn_combo_scaffold_1815_7
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5338..5838
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035F162E
Exclusion suppressor FxsA {ECO:0000313|EMBL:ESW88925.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s
fxsA; FxsA protein
cn_combo_scaffold_1815_8
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5934..6437
DNA (504bp) protein (168aa)
preprotein translocase subunit SecB n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B7E28
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizo
preprotein translocase subunit SecB
cn_combo_scaffold_1815_9
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6535..7278)
DNA (744bp) protein (248aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III subunit epsilon n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D72DA
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:ESX80303.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorh
cn_combo_scaffold_1815_10
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7376..7966)
DNA (591bp) protein (197aa)
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=763057 species="Bacteria; Pr
dephospho-CoA kinase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036BCBBD
cn_combo_scaffold_1815_11
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7963..8802)
DNA (840bp) protein (280aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
shikimate 5-dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI000369B53B
shikimate 5-dehydrogenase
cn_combo_scaffold_1815_12
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8795..9394)
DNA (600bp) protein (200aa)
septum formation protein Maf n=1 Tax=Hoeflea sp. 108 RepID=UPI00035E6696
Maf-like protein X739_08005 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizo
Maf family protein
cn_combo_scaffold_1815_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9447..10268)
DNA (822bp) protein (274aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00
PEP synthetase regulatory protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F4F2C
hypothetical protein
cn_combo_scaffold_1815_14
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10669..11700
DNA (1032bp) protein (344aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
uroporphyrinogen decarboxylase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035F0AE8
cn_combo_scaffold_1815_15
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11697..12236
DNA (540bp) protein (180aa)
membrane protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036BA997
Uncharacterized protein {ECO:0000313|EMBL:CDX13552.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
TIGR00701 family protein
cn_combo_scaffold_1815_16
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12404..13666
DNA (1263bp) protein (421aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=653930 specie
transcription termination factor Rho n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D8F3AB
rho; transcription termination factor Rho
cn_combo_scaffold_1815_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13674..15692)
DNA (2019bp) protein (673aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000373BA01
Uncharacterized protein {ECO:0000313|EMBL:CDX37311.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
thioredoxin domain protein
cn_combo_scaffold_1815_18
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15758..17074
DNA (1317bp) protein (439aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyll
UPI0003CE6788 related cluster n=1 Tax=unknown RepID=UPI0003CE6788
small GTP-binding protein
cn_combo_scaffold_1815_19
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17251..19125
DNA (1875bp) protein (625aa)
tRNA uridine 5-carboxymethylaminomethyl modification protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036CD5C2
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=763057 species="Bacter
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
cn_combo_scaffold_1815_20
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19122..19754
DNA (633bp) protein (211aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltran
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BCD0A
methyltransferase GidB
cn_combo_scaffold_1815_21
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19788..20585
DNA (798bp) protein (266aa)
chromosome partitioning protein ParA n=1 Tax=Hoeflea sp. 108 RepID=UPI00037055C4
Chromosome partitioning protein ParA {ECO:0000313|EMBL:CDX13535.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso
chromosome partitioning protein, ParA
cn_combo_scaffold_1815_22
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20627..21514
DNA (888bp) protein (296aa)
chromosome partitioning protein ParB n=1 Tax=Hoeflea sp. 108 RepID=UPI000373559A
Chromosome partitioning protein ParB {ECO:0000313|EMBL:EZQ14715.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud
parB-like partition protein
cn_combo_scaffold_1815_23
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21567..22613)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000380BFB6
DNA polymerase III subunit delta {ECO:0000313|EMBL:ESZ10400.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
DNA polymerase III, delta subunit
cn_combo_scaffold_1815_24
Brucella melitensis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22737..22877)
DNA (141bp) protein (47aa)
Predicted protein n=251 Tax=Brucella RepID=D0B574_BRUME
Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion
Predicted protein {ECO:0000313|EMBL:EEW88548.1}; TaxID=224914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella melitensis biotype 1 (stra
cn_combo_scaffold_1815_25
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22874..25144)
DNA (2271bp) protein (757aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000380B44F
nitrogen fixation protein fixI
Nitrogen fixation protein FixI {ECO:0000313|EMBL:BAB52879.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium l
cn_combo_scaffold_1815_26
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25141..25638)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000371A877
Cytochrome oxidase {ECO:0000313|EMBL:ESX35659.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC
nitrogen fixation protein fixH
cn_combo_scaffold_1815_27
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25635..27191)
DNA (1557bp) protein (519aa)
nitrogen fixation protein fixG n=1 Tax=Hoeflea sp. 108 RepID=UPI000360BD25
ccoG; cbb3-type cytochrome oxidase, accessory protein CcoG
Cbb3-type cytochrome oxidase, accessory protein CcoG {ECO:0000313|EMBL:AEI05493.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;"
cn_combo_scaffold_1815_28
Mesorhizobium sp. LSJC265A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27368..28231)
DNA (864bp) protein (288aa)
cytochrome CBB3 n=1 Tax=Hoeflea sp. 108 RepID=UPI0003719D18
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1287322 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
cytochrome c oxidase, cbb3-type subunit III
cn_combo_scaffold_1815_29
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28235..28384)
DNA (150bp) protein (50aa)
Cytochrome-c oxidase fixQ chain n=3 Tax=Agrobacterium RepID=F0L4M8_AGRSH
fixQ; cytochrome c oxidase, FixQ chain
Nitrogen fixation protein FixQ {ECO:0000313|EMBL:KJF74699.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacter
cn_combo_scaffold_1815_30
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28395..29126)
DNA (732bp) protein (244aa)
peptidase S41 n=1 Tax=Hoeflea sp. 108 RepID=UPI00037E241F
Cytochrome c oxidase subunit FixO {ECO:0000313|EMBL:EYR80654.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.
Cytochrome c oxidase, cbb3-type, subunit II
Displaying items 1-30 of 31 in total

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