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Montesol18-Sp2_coassembly_scaffold_21696

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_21696_1
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..682)
-----------------
DNA (681bp)
protein (227aa)
MscS Mechanosensitive ion channel n=1 Tax=Beggiatoa sp. PS RepID=A7BXC8_9GAMM
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:EDN68805.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
MscS Mechanosensitive ion channel
Montesol18-Sp2_coassembly_scaffold_21696_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(714..2108)
-----------------
DNA (1395bp)
protein (465aa)
Amino acid permease-associated region n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZX1_SOLUE
Amino acid permease-associated region {ECO:0000313|EMBL:ABJ84794.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Amino acid transporter
Montesol18-Sp2_coassembly_scaffold_21696_3
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2254..3159)
-----------------
DNA (906bp)
protein (302aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BTL5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR20971.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_21696_trna_1
unknown

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comp(3195..3281)
-----------------
DNA (87bp)
transferRNA Ser
Montesol18-Sp2_coassembly_scaffold_21696_4
Oikopleura dioica, Oikopleura, Appendicularia, Chordata, Metazoa

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3566..3871
-----------------
DNA (306bp)
protein (102aa)
Whole genome shotgun assembly, allelic scaffold set, scaffold scaffoldA_28 n=1 Tax=Oikopleura dioica RepID=E4Y708_OIKDI
Whole genome shotgun assembly, allelic scaffold set, scaffold scaffoldA_28 {ECO:0000313|EMBL:CBY31408.1}; TaxID=34765 species="Eukaryota; Metazoa; Chordata; Tunicata; Appendicularia; Oikopleuridae; Oikopleura.;" source="Oikopleura dioica (Tunicate).;"
Montesol18-Sp2_coassembly_scaffold_21696_5
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4086..4913
-----------------
DNA (828bp)
protein (276aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037C6F01
hypothetical protein
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
Montesol18-Sp2_coassembly_scaffold_21696_6
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5003..5983
-----------------
DNA (981bp)
protein (327aa)
Lytic murein transglycosylase n=1 Tax=Oceanibaculum indicum P24 RepID=K2KDX1_9PROT
lytic murein transglycosylase
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
Montesol18-Sp2_coassembly_scaffold_21696_7
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6024..7175
-----------------
DNA (1152bp)
protein (384aa)
Putative lipoprotein RlpA-like n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z5F1_AZOL4
putative lipoprotein RlpA-like
Putative lipoprotein RlpA-like {ECO:0000313|EMBL:CBS86993.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Montesol18-Sp2_coassembly_scaffold_21696_8
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7296..8579
-----------------
DNA (1284bp)
protein (428aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JK41_9PROT
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:EWY42246.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
dacA; serine-type D-Ala-D-Ala carboxypeptidase
Montesol18-Sp2_coassembly_scaffold_21696_9
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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8576..9271
-----------------
DNA (696bp)
protein (232aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
tmk; Thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3ADJ0_9PROT
Montesol18-Sp2_coassembly_scaffold_21696_10
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9268..10377
-----------------
DNA (1110bp)
protein (370aa)
DNA polymerase III subunit delta n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZU00_9PROT
DNA polymerase III subunit delta {ECO:0000313|EMBL:KJR65052.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
DNA polymerase III, delta prime subunit
Montesol18-Sp2_coassembly_scaffold_21696_11
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10514..12103
-----------------
DNA (1590bp)
protein (530aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NVM7_AZOS1
Montesol18-Sp2_coassembly_scaffold_21696_12
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12105..12902
-----------------
DNA (798bp)
protein (266aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI0003822795
TatD family hydrolase
Hydrolase, TatD family {ECO:0000313|EMBL:ABS64721.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Montesol18-Sp2_coassembly_scaffold_21696_13
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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12899..13672
-----------------
DNA (774bp)
protein (258aa)
Metallo-beta-lactamase superfamily n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMK6_RHOCS
metallo-beta-lactamase superfamily
Metallo-beta-lactamase superfamily {ECO:0000313|EMBL:ACI98585.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Montesol18-Sp2_coassembly_scaffold_21696_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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13936..14868
-----------------
DNA (933bp)
protein (311aa)
Methylase involved in ubiquinone/menaquinone biosynthesis-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVS9_KORVE
ubiquinone/menaquinone biosynthesis methyltransferase
Methylase involved in ubiquinone/menaquinone biosynthesis-like protein {ECO:0000313|EMBL:ABF39021.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Displaying 15 items

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