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Montesol18-Sp2_coassembly_scaffold_227254

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_227254_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..146)
-----------------
DNA (144bp)
protein (48aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I233_9RHIZ
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EHK52919.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
enoyl-CoA hydratase
Montesol18-Sp2_coassembly_scaffold_227254_2
unknown

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498..1403
-----------------
DNA (906bp)
protein (302aa)
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_227254_3
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1760..2980
-----------------
DNA (1221bp)
protein (407aa)
Cystathionine beta-lyase/cystathionine gamma-synthase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JLV3_9PROT
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:GAN76128.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
cystathionine beta-lyase/cystathionine gamma-synthase
Montesol18-Sp2_coassembly_scaffold_227254_4
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3094..3486
-----------------
DNA (393bp)
protein (131aa)
Protein ApaG n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TWP1_9PROT
apaG; ApaG protein
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
Montesol18-Sp2_coassembly_scaffold_227254_5
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3560..4228
-----------------
DNA (669bp)
protein (223aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
GTP cyclohydrolase 1 n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NYK3_AZOS1
Montesol18-Sp2_coassembly_scaffold_227254_6
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4286..5734
-----------------
DNA (1449bp)
protein (483aa)
potassium transporter TrkH n=1 Tax=Thalassospira lucentensis RepID=UPI0003B70424
Trk system potassium uptake protein {ECO:0000256|PIRNR:PIRNR006247}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
cation transport family protein
Montesol18-Sp2_coassembly_scaffold_227254_7
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5751..6920
-----------------
DNA (1170bp)
protein (390aa)
Acetylornithine deacetylase {ECO:0000256|SAAS:SAAS00063950}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279026};; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00279018};; EC=3.5.1.16 {ECO:0000256|SAAS:SAAS00063953};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
Acetylornithine deacetylase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RQA3_9RHIZ
acetylornithine deacetylase
Montesol18-Sp2_coassembly_scaffold_227254_8
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6927..7526)
-----------------
DNA (600bp)
protein (200aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J670_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
Montesol18-Sp2_coassembly_scaffold_227254_9
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7617..8369)
-----------------
DNA (753bp)
protein (251aa)
Molecular chaperone Hsp33 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JIY8_9PROT
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
Hsp33 protein
Montesol18-Sp2_coassembly_scaffold_227254_10
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8440..9369)
-----------------
DNA (930bp)
protein (310aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=uncultured bacterium RepID=C5JBK8_9BACT
Montesol18-Sp2_coassembly_scaffold_227254_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9374..10588)
-----------------
DNA (1215bp)
protein (405aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Acetylornithine aminotransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQ42_PARL1
acetylornithine and succinylornithine aminotransferase
Montesol18-Sp2_coassembly_scaffold_227254_12
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10719..11609)
-----------------
DNA (891bp)
protein (297aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00037ECB0E
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
putative transporter subunit: membrane component of ABC superfamily
Montesol18-Sp2_coassembly_scaffold_227254_13
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11626..12189
-----------------
DNA (564bp)
protein (188aa)
Regulatory protein RecX n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z2S9_AZOL4
putative regulator of DNA repair (RecX-like)
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Montesol18-Sp2_coassembly_scaffold_227254_14
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12267..12815
-----------------
DNA (549bp)
protein (183aa)
transcriptional regulator n=1 Tax=Nevskia ramosa RepID=UPI0003B4737B
Transcriptional regulator {ECO:0000313|EMBL:KJK24824.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
BadM/Rrf2 family transcriptional regulator
Montesol18-Sp2_coassembly_scaffold_227254_15
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12812..14053
-----------------
DNA (1242bp)
protein (414aa)
NADH dehydrogenase (EC:1.6.99.3)
NADH dehydrogenase {ECO:0000313|EMBL:CAP44275.1}; EC=1.6.99.3 {ECO:0000313|EMBL:CAP44275.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
NADH dehydrogenase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I675_BORPD
Montesol18-Sp2_coassembly_scaffold_227254_16
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14043..16250)
-----------------
DNA (2208bp)
protein (736aa)
Putative MscS Mechanosensitive ion channel n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z769_AZOL4
Mechanosensitive ion channel protein {ECO:0000313|EMBL:EWY38461.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
putative MscS Mechanosensitive ion channel
Montesol18-Sp2_coassembly_scaffold_227254_17
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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16507..17529
-----------------
DNA (1023bp)
protein (341aa)
ABC transporter, substrate-binding component n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z8N2_AZOL4
ABC transporter, substrate-binding component
ABC transporter, substrate-binding component {ECO:0000313|EMBL:CBS85798.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Montesol18-Sp2_coassembly_scaffold_227254_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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17559..18347
-----------------
DNA (789bp)
protein (263aa)
ABC transporter, ATP-binding component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEU3_AZOBR
nitrate ABC transporter ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Montesol18-Sp2_coassembly_scaffold_227254_19
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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18340..19134
-----------------
DNA (795bp)
protein (265aa)
Sulfonate/nitrate/taurine transport system permease protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NS12_AZOS1
tauC; sulfonate/nitrate/taurine transport system permease
Sulfonate/nitrate/taurine transport system permease protein {ECO:0000313|EMBL:BAI71191.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Montesol18-Sp2_coassembly_scaffold_227254_20
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19125..20426
-----------------
DNA (1302bp)
protein (434aa)
FAD dependent oxidoreductase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WUX2_9BURK
FAD-dependent oxidoreductase
FAD-dependent oxidoreductase {ECO:0000313|EMBL:AJE97150.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
Montesol18-Sp2_coassembly_scaffold_227254_21
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20517..21266
-----------------
DNA (750bp)
protein (250aa)
Gp37Gp68 family protein n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KES8_METEX
Phage protein Gp37/Gp68 {ECO:0000313|EMBL:KKB07143.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
phage Gp37Gp68
Montesol18-Sp2_coassembly_scaffold_227254_22
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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21285..22004
-----------------
DNA (720bp)
protein (240aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P1J3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX58345.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
Displaying 22 items

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