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cn_combo_scaffold_3816_2

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: 857..3475

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00036FFC9B similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 835.0
  • Bit_score: 576
  • Evalue 3.70e-161
LuxR family transcriptional regulator {ECO:0000313|EMBL:KDA06406.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH1 similarity UNIPROT
DB: UniProtKB
  • Identity: 42.0
  • Coverage: 880.0
  • Bit_score: 567
  • Evalue 2.40e-158
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 858.0
  • Bit_score: 406
  • Evalue 2.50e-110

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Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2619
ATGAGCATCACTCTCCACTCGCGCTCCGTCGCGCCCGCGACCGTCACTCCGCTCCCGCGCCTCGTGCGCCGCCAGGTCGACGACCTCCTCGCCGACGCCGACCAGACGCCCGTGCGGGCCCTCATCCTCGGGCCCGCCGGATCCGGTCGGTCTTCGCTCGTACGCTCGGTGTCGACCGCACTCCGGGAGGACGGCATCCGTGTCGTCGACCTGGGCGCGGCGGGACCGCTCGACGATGTGCCCGCTGACACGGTCGTGGTCGTCGATGATGCGCACCTCCTCGACGACGCGACCCTGCAGGCCGTGCGCGGGCGGGCGGCGCGAACGGATGCCGCGCTCGTGGTCGCGGTGCGGCCGGACCCCACGCGGTCCGAGCTCGCGGCCCTGACGCAGGAGCTCGAGCGGTCGCACCCGCCGCTCGTCCTCGGCACGATCCGCGTCGAGGACGTGCTGGCAGACCCCGCGTCCGCGCACCTCCCCCGCGCGTGCGTCCAGGCGATGATCGATCGGGCCGGCGGACTCGCCTGGCTCGTGTCGACCTCCCTCGCCCTCCACGACGACGACTGCGCGGGCCCCGCGGGGCACCACGGGATCGATGAGGCCCTCGCCGACGCGATCGCGCACCGCGCGGCATCCCTCGACGCCGACCTCCGGGCCTTCCTCGAGGCGGCCTGCTTCGCGGACGCGCCCCTCGGCGGCGACGAGCTCATCGAGCGCGGGCACGCCGCGGGTCTGCTCCGTCGGAACGGCACGCCGCCGCCGACGGTCAAGGCCGCCGTGTGCGCGAGCGCGCCCGCTGAGCGCGTGCTGGCGGGGTGGCACGGCGACACCGCCGACGGGGAGATGGGCGAGGCCCTCGTCGGCGTCGGTGACGAGCGCGTGGCCGCGTTCCTCCTCGACCGGGCCCAGTCCATGCTGACGACCGATCCGCAGCGCGCCATCGGGCTCTTCCGTGACGCGCAGGCCGCGCACGCCCCGCTCGCGGCGACGAGCCGCGGCATCCTCGTCGCCCACCACCTGCTCGGCGACCTCGACGCGGTGAGCGCGGGGCTGGATGCCGCGCTCGGCGATCCCGACGAGACGGTGACCGATCTCGCTGCCGCGCACTGGATGGCGCGGGGAATGGCGGCCCAGGCAGACGCGACCTATCGGACGCGTCCGCCGCGGTCGTTCGGCGGCCGCGCCCAGGCCGCCCTCGCGGCGCTCGCCCTCGGCGACCGTTCGGCGCTGGACGCGCTGACGGCCGAGCAGGCGCCCGCATCGCTCTCGACCGCCGACACCGCGGCGCAGTTCCTGCTCCGCGGCCTCGCCGCGACGCTCGGCGATACTCCCGCCGCGGCGCTCGGCGACCTCGCCCGCGCCTCGGACCTCTGCACGGCGACCGGATGCGGACGGTTCCTGCCGGAGCTCCCCGCCGTCATCGCCGCTCAGTGCGCGATCAACGTCGGAGAGCTCGACGTCGCGCGCTCGGTCCTCGCGGACGCGCTCCGCGGCGGGCAGGGCGGCATCGCCGGGCGTGACCGTCTGCGCCTGTGGTCGGCGTGGGTGGCGCTTCAGCGCGAGCGGCCGCACGACGCCGAGGCGTTCCTCGCCGACGCCGTCGGGTCGACCCGCCCGCTCGACCCGCGCGACCGTCTCCTGGCCGACGCGCTGCGTCTGGCGACCGCGCGTCGGTACGGCGACGCGACCGACCTCACGATCGCATGGAACGCCGCGCGCGACGACCTCCTGCGCACCTCTTTCGACCTGTTCAGCCTGCTGCCGCTGACGGAGTTCGTCGTCGCCTCCGCGCGTGTGAAGGACCCCGCGCGCGTCGCGGGCTTCTTCACCGACGCCGAGGCTCTCATCGACGGGCTCGGAGCGCCGATCGGCTGGGGCGTGCACCTGCACTGGGCGGGCATCCAGCGCGGCATCCTCTCGAGCAAGCCCGACGATCTGCCGCCGCACGCGCGGGTCCTCGTCGCCGCTGCGGCACGCAACCGCATCGCGGCGATGATGGCGCACGCCGGACGGGTGTGGATCGCCGTCCTCGCCGGCCAGGTGGATGCCGATGCCGTGGAGTCGGCGGCGATGGGGTTGGCGTCCGTGGGACTGGCGTGGGACGGGGCACGGATGGCCGGCCACGGTGCGCGCCGGACCGACGACAAGCGGATCGCCGCCCGTCTGCTCGCCTGCGCCCGTCAGCTGCACCCGCGCGAGGAGCACGGTCCGGTCGAGACGGGTTCGACCCAGACACCGGCGGCGAGCACCGCCGTCGAGCCGAACGGACCGCTGTCGCCGCGCGAACGTGAAGTCGCCGAACTCGTGCTCCAGGGCAAGACGTACACCGAGATCGGGGCGACGATCTTCATCTCCCCCCGGACCGCGGAGCACCACATCGCACGCATCCGCCGGCGGCTCGGGGCGACCTCCCGATCGGACCTGCTGGCCAAGCTCCGGGCGGCCCTCGCCGGGGAGGACGCGAGCAGCGCACTCTACCCCGCGGACGACGAATCCGACACCCGTTCGGACCGAACCCCGTCGATCCCCGGATCCCCCTCCCCCCACCCCCTAGTGGGGGAGGACGGACGAGGGGACATCCACCGACGCGGTGAGAGCCGTACCCGTCTTACTGTCTAA
PROTEIN sequence
Length: 873
MSITLHSRSVAPATVTPLPRLVRRQVDDLLADADQTPVRALILGPAGSGRSSLVRSVSTALREDGIRVVDLGAAGPLDDVPADTVVVVDDAHLLDDATLQAVRGRAARTDAALVVAVRPDPTRSELAALTQELERSHPPLVLGTIRVEDVLADPASAHLPRACVQAMIDRAGGLAWLVSTSLALHDDDCAGPAGHHGIDEALADAIAHRAASLDADLRAFLEAACFADAPLGGDELIERGHAAGLLRRNGTPPPTVKAAVCASAPAERVLAGWHGDTADGEMGEALVGVGDERVAAFLLDRAQSMLTTDPQRAIGLFRDAQAAHAPLAATSRGILVAHHLLGDLDAVSAGLDAALGDPDETVTDLAAAHWMARGMAAQADATYRTRPPRSFGGRAQAALAALALGDRSALDALTAEQAPASLSTADTAAQFLLRGLAATLGDTPAAALGDLARASDLCTATGCGRFLPELPAVIAAQCAINVGELDVARSVLADALRGGQGGIAGRDRLRLWSAWVALQRERPHDAEAFLADAVGSTRPLDPRDRLLADALRLATARRYGDATDLTIAWNAARDDLLRTSFDLFSLLPLTEFVVASARVKDPARVAGFFTDAEALIDGLGAPIGWGVHLHWAGIQRGILSSKPDDLPPHARVLVAAAARNRIAAMMAHAGRVWIAVLAGQVDADAVESAAMGLASVGLAWDGARMAGHGARRTDDKRIAARLLACARQLHPREEHGPVETGSTQTPAASTAVEPNGPLSPREREVAELVLQGKTYTEIGATIFISPRTAEHHIARIRRRLGATSRSDLLAKLRAALAGEDASSALYPADDESDTRSDRTPSIPGSPSPHPLVGEDGRGDIHRRGESRTRLTV*