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ACD4_93_12

Organism: ACD4

near complete RP 46 / 55 MC: 12 BSCG 46 / 51 MC: 2 ASCG 0 / 38
Location: 7750..8682

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 295.0
  • Bit_score: 218
  • Evalue 3.30e-54
rluA_subfam: pseudouridine synthase, RluA (db=HMMTigr db_id=TIGR00005 from=9 to=307 evalue=2.4e-59 interpro_id=IPR006225 interpro_description=Pseudouridine synthase, RluC/RluD GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.40e-59
RIBOSOMAL PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR10436 from=5 to=282 evalue=7.1e-56) iprscan interpro
DB: HMMPanther
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.10e-56

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Taxonomy

uncultured bacterium (gcode 4) → Bacteria

Sequences

DNA sequence
Length: 933
ATGAAATTTTGCGTTTATATATTTGAAAGGGAAATACGAAGAGTTGATATGTATCTATCAGCTCTTTTTAAGGATCAATCCAGAAATTATATTCAAAAGCTTATTGAAAAATGATTGGTTAAAGTCAATGGAAAAATAGTTTCAAAAAATGAAAAATTAAGGAATAAAGATGAAATCGAGATGATTTTTGAAACAGAAAAAATGGAAATAGAAGCTGAAAAAATGGATCTTGATATTATTTTTGAAAATGAAGATTTCGCAGTAATAAATAAGGATCCAGGAATAAATGTACATCCGGTTCCAGGTGAATGATGAAGATCTTGAACACTCGTAAATGCACTCTTATATCATATGCAATGATTATCTGTCATAAATTGAATAGAACGTCCATGAATTGTCCATAGACTGGATAAAAACACAAGCTGACTTTTGATTATTGCAAAAAATGACAAATCAATGAAATCTTTGCAAATCAAAATGAACAAAAGAACGATTAAAAAAACTTATTTGGCCATAGTTTGCTGAATCATTAAGGATAAAGAGGGTTATATCGAGTCATTTGTCTGAAGAGATCAATTCGACAGGAAAAAAATGACTGTCATAAATCCGATTAATCCTAAATTAGCCAAAACAAAATTTAAGGTTTTAGGTTATCTTGATGATAAATTTACCTTGGTTGAAGTTGATCTTTTGACATGAAGAACGCATCAGATAAGAATTCATTTTGCAAGTATAGGCTTTCCGATTGTTTGAGACACGACTTATTGAAATCAAAAAATCAATGAACAAGCATATAATAAATATAATTTGAATAGACAATATCTTCATGCGTATAAATTAAGTTTTAATTTATTTTGAGAAGATTATAACTTTAAGGCAGAATTGAAAAAAGATTTGATTGATATTTATAATGAGGTGAAGCTTTTTGATTAG
PROTEIN sequence
Length: 311
MKFCVYIFEREIRRVDMYLSALFKDQSRNYIQKLIEKGLVKVNGKIVSKNEKLRNKDEIEMIFETEKMEIEAEKMDLDIIFENEDFAVINKDPGINVHPVPGEGGRSGTLVNALLYHMQGLSVINGIERPGIVHRLDKNTSGLLIIAKNDKSMKSLQIKMNKRTIKKTYLAIVCGIIKDKEGYIESFVGRDQFDRKKMTVINPINPKLAKTKFKVLGYLDDKFTLVEVDLLTGRTHQIRIHFASIGFPIVGDTTYGNQKINEQAYNKYNLNRQYLHAYKLSFNLFGEDYNFKAELKKDLIDIYNEVKLFD*