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berkeley_reactor_200306_biofilm_scaffold_5264_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Bacteroidetes_44_168

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(2452..3177)

Top 3 Functional Annotations

Value Algorithm Source
xylose isomerase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003805E13 similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 245.0
  • Bit_score: 287
  • Evalue 9.60e-75
xylose isomerase similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 248.0
  • Bit_score: 292
  • Evalue 8.40e-77
Xylose isomerase {ECO:0000313|EMBL:AKD55641.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 248.0
  • Bit_score: 292
  • Evalue 4.20e-76

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Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 726
ATGGCAAAAGACCCTAAAACCGTGCTGAAACAGGTAGCAGCCCTGGGATATAAAGAAGTAGAATCGTTTGGATATAATGCGGGTAAATATTTCGGGATGACGCCGTCTGAATTTGCTTCAGTATTAAAAGGTTACGGGCTTGCTCATCCCAGCGGTCACTATATGCTGACCGCCCTTTCCGGCGACTGGAACAAAGCTATTGAAGATGCGGTAACGGCAGGGCAGCAGTATATGGTGCTGGCATATCTTATCGATGAAGAAAGAAAGAATATAGACGATTACAAAAAGATAGCTGTGCAGATGAATGCTGCAGGAGAAGCATGTAAAAAAGCAGGGATACAGTTTGCATACCACAATCATAATTTTGAGTTTGCCGATATGAACGGTCAGCACGGGTATGATATTTTTCTCCGGGAAACTGATCACGACCTGGTAAAATTTGAGCTCGATCTTTACTGGATATCATTTGCCGGTAAAGACCCGGTTGAAATGTTTAAGCAACATCCCGGCAGGTTCCCGCTCTGGCATGTGAAAGACATGGATAATACGAGCCGGAAATTTTTTACGGAAGTAGGCAATGGCGTGATTGATTTCAAAAGCATATTTGCAGCTTCCAAAACTGCAGGGATGAAACATTTTTTTGTGGAACAGGACACCTGCCCCGGTCCGCCCATGGTAAGTATTGAGAAAAGTATTCGGTACCTCGAGAAAAACATTGTGAAATAA
PROTEIN sequence
Length: 242
MAKDPKTVLKQVAALGYKEVESFGYNAGKYFGMTPSEFASVLKGYGLAHPSGHYMLTALSGDWNKAIEDAVTAGQQYMVLAYLIDEERKNIDDYKKIAVQMNAAGEACKKAGIQFAYHNHNFEFADMNGQHGYDIFLRETDHDLVKFELDLYWISFAGKDPVEMFKQHPGRFPLWHVKDMDNTSRKFFTEVGNGVIDFKSIFAASKTAGMKHFFVEQDTCPGPPMVSIEKSIRYLEKNIVK*