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berkeley_reactor_200306_biofilm_scaffold_47405_9

Organism: 2019_SCN_bioreactor_200211_biofilm_Bacteroidetes_44_168

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 10808..13291

Top 3 Functional Annotations

Value Algorithm Source
MscS Mechanosensitive ion channel n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFM3_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 827.0
  • Bit_score: 933
  • Evalue 8.80e-269
mechanosensitive ion channel MscS similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 827.0
  • Bit_score: 933
  • Evalue 2.50e-269
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:AEV99462.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 827.0
  • Bit_score: 933
  • Evalue 1.20e-268

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2484
ATGAAAAGCGGTTACAGGGCGTACCTGATCGTATGTATTCTTTCACTATGTATTTTCAATCTTAATGCCCAGGATACCCTGAAAGAGCGGGGCTCACGTTTCCGGTCGCGGGATTCTGTTATGAATAACAACGATACCGGGCGGTTTCACCGCGGAGACATGTTTCGCTCCCCGCAGGATGTTGCGGGGCGGAATAATAACGATACCGGGCGTTTCAGGCGTGGAGGAATGTCTTCCATTTTCTCAGACTCAACCCAGCTGACCACGAGTGATTACCAGGCTGAAATTGAAAAGTCATATATACTTCTTGATAAAATAGGTAACAATAGTAATCTTGGCCCTGCTGTAAAAAAGATAGCAAAGGATCTTAATGATAATGATTCAATTCTGGCCGTACTTAATGATAATATTACCAACAACAGCAAGGCCCTGAGCTTCAGAAATCTGGAAGTATATAAAACCTTACTGAATAATATTAATGATGAGATTGGATTTTATAATGTTGCGCTCGACAGTGCGGATGCGCGCCTTACTCTTTTAAAGAAAGATATGCGCACACTTATTGGCGATACCATTATCAGGCAAATGATGAAGGATTCTGCTTTGAGACAACAATTTTCAGCACAGCTCAATGACCTTAGAAGCAACTGGCGGCAAAATACCAGGGAGCTGAGAAGGAATGATGCATTACTTGAACAACTGCAAACGCAGGTATCTGCCAGTTCTGTTTTAACAATTCAATTGCTTGAAAAAGTAGAAACCCTGCTGGTATCATCAACGGTAAGACTATTTGGAAAAGAATATAGCTATATATGGGAAAAAGCTTCCGACAGCTCATTACAGCAGCTTAAAGCTTCTTTTGAAAAAGCATATAAAGGCGAACGGAAAGCTACGCGTTATTATTTTAAAGATTCCGGACCCCGCCGGTTATTGTTATTGCTGATTGCTGTTGCTTTTTTTATATGGGTATTTCGCAATATCAGGGTTATCAAAAATCACCATGCGCTGAGTGCTGTAAGGGATATGGATTTTTCGTTTATTCTTACAGGTTATATTGTCTCCTCATTTGTGGTGATGTTTGTAATAGCGCCATTGTTTGACCTTCATGCGCCATCGGCTTACATAGAATCCATGCAGTTTCTGCTTATTATTGTGCTCACTGTTGTTTGCTGGAAAAAGTGGCCGCGCAGTTTGTTCTATTACTGGACAGGCATTGTGCTTCTTTTTATCGCGTTTTCATTCATGCATCATATTCTGGCGCCGGACTTTTTTCAACGAAGCTGGCTGATTATATTGAATGTACTCTCAATAGTGCTGGGCTCTTTGTTTTTAAGAAAAATGCAGCAATACCTTTACCTGAAAGGGTTTATTCGTTTTGTGATCATACTTCATAATTTTATGAACCTGCTTGCTATCTTATGCAATGTATTTGGCAGATTTTCATTGGCGCAGATACTCGGTAACGCGGCAATATATTCATTTACACAGGCAATAGGGCTTGCAGTATTCAGCAAGGTGTGTATTGAAGCAATATTGCTGCAGATTGCCGCAAGCCGTATTAAAAGAGATGCTGCCGTCCGGTTTGATTACCAGCATGTGCTGGATGGTTTCCGCAAGCCCATTTTATTTCTTGTGGTGGTATTATGGTTAATTGTATTTACAACTAATCTGAATATCTATAATTCATTATTTGATGGATTGTCTGCCATTTTAGGAAAAGAACGAAATATAGGTAACGCTAATTTTTCATACGGGGGCGTATTGCTTTTCTTTTTTATAATATGGATGGCGCACCTGTTGCAAAAATATATTGGCTACTTTTTTGGAGAAACCGGTGAAGACGATGATATAACGAATAAGAATAAACGCTCCAGGCTGCTGATCACAAAACTTGTTTTACTATGCGCAGGTTATTTTCTTGCCATTGCCGCTTCGGGGTTGCCTATTGATAAAATAACAATTGTAATTGGCGCTCTTGGTGTTGGTATAGGCTTGGGTTTACAGAGTATTGTTAATAATTTTGTCTCGGGCATAATATTAATTTTTGACAGGCCAATACAGATAGGAGACTCCGTTGAAATTGGTAATAAAGCCGGGAGGGTAAAAGAGATTAATTTAAGATCGAGCACACTGCTAACTCCTGACGGCGCGGAAGTAATAATACCCAACGGCGATATTCTTACGCAACATATTGTAAACTGGACCTTATCTAACAACCAGCAAAGGCTTGAAATGAATTTTACCGTAACAGGCAGCTCAGATATGGAAAGCGTTGCAACGCTGGTAAAGAAAGCAATTTTGAGTTCTGCGTATATTTTTAAAAGTAAAGAGCCGCAGGTTTTATTTACTGCAGTAAAAGATGACGGATTTGATCTGAAGGTATTTTTTTGGTCGCAAGACGTATATAAATCGGCAGAGGCAAAAAGTGAAATAACCTTACTGCTGCACAATACACTGAAGGCGGAAGGTTTGCTTGTTACATAA
PROTEIN sequence
Length: 828
MKSGYRAYLIVCILSLCIFNLNAQDTLKERGSRFRSRDSVMNNNDTGRFHRGDMFRSPQDVAGRNNNDTGRFRRGGMSSIFSDSTQLTTSDYQAEIEKSYILLDKIGNNSNLGPAVKKIAKDLNDNDSILAVLNDNITNNSKALSFRNLEVYKTLLNNINDEIGFYNVALDSADARLTLLKKDMRTLIGDTIIRQMMKDSALRQQFSAQLNDLRSNWRQNTRELRRNDALLEQLQTQVSASSVLTIQLLEKVETLLVSSTVRLFGKEYSYIWEKASDSSLQQLKASFEKAYKGERKATRYYFKDSGPRRLLLLLIAVAFFIWVFRNIRVIKNHHALSAVRDMDFSFILTGYIVSSFVVMFVIAPLFDLHAPSAYIESMQFLLIIVLTVVCWKKWPRSLFYYWTGIVLLFIAFSFMHHILAPDFFQRSWLIILNVLSIVLGSLFLRKMQQYLYLKGFIRFVIILHNFMNLLAILCNVFGRFSLAQILGNAAIYSFTQAIGLAVFSKVCIEAILLQIAASRIKRDAAVRFDYQHVLDGFRKPILFLVVVLWLIVFTTNLNIYNSLFDGLSAILGKERNIGNANFSYGGVLLFFFIIWMAHLLQKYIGYFFGETGEDDDITNKNKRSRLLITKLVLLCAGYFLAIAASGLPIDKITIVIGALGVGIGLGLQSIVNNFVSGIILIFDRPIQIGDSVEIGNKAGRVKEINLRSSTLLTPDGAEVIIPNGDILTQHIVNWTLSNNQQRLEMNFTVTGSSDMESVATLVKKAILSSAYIFKSKEPQVLFTAVKDDGFDLKVFFWSQDVYKSAEAKSEITLLLHNTLKAEGLLVT*