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berkeley_reactor_200306_biofilm_scaffold_47405_15

Organism: 2019_SCN_bioreactor_200211_biofilm_Bacteroidetes_44_168

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 18847..19869

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HU70_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 342.0
  • Bit_score: 226
  • Evalue 3.70e-56
Uncharacterized protein {ECO:0000313|EMBL:ERJ59037.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.9
  • Coverage: 342.0
  • Bit_score: 226
  • Evalue 5.20e-56
anti-feci sigma factor, fecr similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 347.0
  • Bit_score: 207
  • Evalue 3.90e-51

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Taxonomy

Sphingobacterium paucimobilis → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1023
ATGCCGGCTTCCCTTACATTAGAACAAATTAAGGAGTACTCACATAAATGGCTGACCGGGACTATTACTGACGAAGAAAAGAAAGCCCTGGAACATTGGTATAACCTTCAGCCGCCTGACATTGTTGCCTGGGGTGCCGGAGGCACCGAAGCAACATTAAGAGAACAGATTTTTGACCGCATTACCGGTAACATTCGTGATATGCGCCACTTGCCGGTAGCCGGGAGGAATAAAAAACAAAACCTCCGTCTTTTGGCTGCGGCATCGGTTGTTTTATTTATTACAGCAGCATCACTATTCTTTTTCAACAACCGGGAACAATCAATAAAAACGATCACTGCTTCCAGGGTACCGGAAAGCAGCTCCGCAAGAGCTGTATCTTATACGCGTTCTGTTACATTGCCAGACAGTAGCATTGTTGTATTAAGAGCTAATAGTACACTGGACTATCCTGCAAAATTTGCTGACGGTAAAAGAGAGGTCAGGTTAACTGGAGAAGCGTATTTTGACATCAGGCACGACGAATCAAAGCCATTTATAGTGTACAGCGGAGAAATAAAAACAGTGGTGCTGGGTACAGCTTTTAATATCAAAGCATATACCGACTCAAAAGACGTTACCGTTTCTGTTATGCGGGGAAAGGTAAGAGTTGAAAAAGCAACTAAGGAAATAGCTGTTTTGATACCTGATCAGCAGGTAACCTGCAATACATCAGCAATGGCAGCAGTTACTGTACCCTCTCATGTGAATGCCGCTTCCATTATAACAGACTGGGCCAAGCAGGATATGGTTTTTGAAGACCTTTCCTTTCAGACAACAGCCAACCTGCTATCCCGGCGATATGCTGTTATGATTGATTTCAAAAATGCTGCACTGGCCCAATGTACCATTAGAGCTTTTTTTAACGGCACCGAAACGCTTGATAAAGTATTGAAGGACTTATGCCTGATCAGTAATGCCACATACACCCGCACAGACGATGGTAAAATTGTGATAGATGGTGAAGGGTGTCGTAATCATTAG
PROTEIN sequence
Length: 341
MPASLTLEQIKEYSHKWLTGTITDEEKKALEHWYNLQPPDIVAWGAGGTEATLREQIFDRITGNIRDMRHLPVAGRNKKQNLRLLAAASVVLFITAASLFFFNNREQSIKTITASRVPESSSARAVSYTRSVTLPDSSIVVLRANSTLDYPAKFADGKREVRLTGEAYFDIRHDESKPFIVYSGEIKTVVLGTAFNIKAYTDSKDVTVSVMRGKVRVEKATKEIAVLIPDQQVTCNTSAMAAVTVPSHVNAASIITDWAKQDMVFEDLSFQTTANLLSRRYAVMIDFKNAALAQCTIRAFFNGTETLDKVLKDLCLISNATYTRTDDGKIVIDGEGCRNH*