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berkeley_reactor_200306_biofilm_scaffold_46111_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Bacteroidetes_44_168

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 934..2358

Top 3 Functional Annotations

Value Algorithm Source
O-antigen repeat unit transporter n=2 Tax=Parabacteroides distasonis RepID=A6L812_PARD8 similarity UNIREF
DB: UNIREF100
  • Identity: 35.3
  • Coverage: 465.0
  • Bit_score: 334
  • Evalue 1.80e-88
O-antigen repeat-containing transporter similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 465.0
  • Bit_score: 334
  • Evalue 5.00e-89
Uncharacterized protein {ECO:0000313|EMBL:EKN24400.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.3
  • Coverage: 465.0
  • Bit_score: 334
  • Evalue 2.50e-88

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Taxonomy

Parabacteroides distasonis → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1425
ATGAGTAAACACTATATCTGGAGTGGATTACAACAATTCGGATCATTAGCAATCGGATTTGCCGGCACTGTTCTTATTGCTCGGTTACTCAATCCTATGGATTATGGGCTCATCGCAGCTTTATCCATTTTTATGAGCATTGCCATGAATTTAACAGAATCTGGGTTTGCTGATTTTCTGATTTCCAAGCAAGACTCTTCGAATGAAGATTTTGCTATTGTTTTTACGCATAATGTTGCATTTGGTGTTTTCTGTTACCTATTACTTTATGTTTCAGCACCTTGGATAGCAGAATTCTATAAAAGCACAGAACTCATATCTATTGCCAGGATTTTGGGGTTGAGTATCGTTCTAAAGGCTCTTTGCATATCAGAAGTTACACGAATGCGAAAAGAACTGCAATTCAGGAAAATTGCTTTGATGCAATTGAGTAGCAGTCTTATTGCTCTGATTGTTGGTTATCTTATGGCATTTTACGGTTGTGGTTATTGGGCCTTGGTTGGGCAAACCGTAATACTTGCATTTTCACAAGTGCTGTATATCATATTGCTAAATAAATGGCGACCTGTTTTCCATTTCAATTGGCAGCGTTACAAGCAAATGCGTGGTTTTGCAAATAATATCCTGCTTTCCTTTTTCACCAATCAATTGGGTGCTAATATGTATTCTGTATTTATTGGTAAGTTTCATAATCCTTTATCACTTGGATATTTTTATCAGGCAGAAAGAGTTAACCAAATCAGCTTTCAAAGTGTGAACAGTATTGTTTTGACTACTTCTTATAGCTTGTTAGCGAAGGAAAACGACAGTAATGAAAGGCGTAAAAAATACAATCAGCTTTTGGATAAGTTTTTGTTTATTCATTTATCAATTAGTTTCTTTACTATAGGGTCTGCCTATTCTATTATAAAGTTGCTGTTTGGTACAAAATGGATGGCTACTGCACCATTGTTACAATTAACCATTATATCCTTTATTCTAACTCCATTAGTTACGGTTAATGCAAACATCACTAAAATAGAAAATAAAACAAATGTTTATCGCAACTTAACTTTTATCAGAAATGGTTTGCTATTTATTGCTTTGCTCATTACATACAGATATTCTTTGCAGATTATTTTGATTGGTCTCATCGTAGCCCGGATTTTATCTGCAATTCTTGATGTTTTTATTTGTGGCAAATATGTGTCTTTTTATCCTTCAACTCAGTTTTTGTTATTTTTCAAACAAGTATACTCTCCCTTGCTAGCCGCAGCAACTTCATATTTAAGCATATATTATTGGGGAGGAAGTAATAACTTTTTGAATTTGGGCATTTATTTCATAACCTTTGGTGTGATCTTTTTCTCTATCAATTATATAAGTAAAAATGCCACATTTTTTTATTTCATCAATAATATACAGAATAAGTTCAAAAAAAGATAG
PROTEIN sequence
Length: 475
MSKHYIWSGLQQFGSLAIGFAGTVLIARLLNPMDYGLIAALSIFMSIAMNLTESGFADFLISKQDSSNEDFAIVFTHNVAFGVFCYLLLYVSAPWIAEFYKSTELISIARILGLSIVLKALCISEVTRMRKELQFRKIALMQLSSSLIALIVGYLMAFYGCGYWALVGQTVILAFSQVLYIILLNKWRPVFHFNWQRYKQMRGFANNILLSFFTNQLGANMYSVFIGKFHNPLSLGYFYQAERVNQISFQSVNSIVLTTSYSLLAKENDSNERRKKYNQLLDKFLFIHLSISFFTIGSAYSIIKLLFGTKWMATAPLLQLTIISFILTPLVTVNANITKIENKTNVYRNLTFIRNGLLFIALLITYRYSLQIILIGLIVARILSAILDVFICGKYVSFYPSTQFLLFFKQVYSPLLAAATSYLSIYYWGGSNNFLNLGIYFITFGVIFFSINYISKNATFFYFINNIQNKFKKR*