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berkeley_reactor_200306_biofilm_scaffold_46111_10

Organism: 2019_SCN_bioreactor_200211_biofilm_Bacteroidetes_44_168

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 9374..11356

Top 3 Functional Annotations

Value Algorithm Source
polysaccharide lyase (EC:4.2.2.-) similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 656.0
  • Bit_score: 543
  • Evalue 5.80e-152
Polysaccharide lyase, family PL12 {ECO:0000313|EMBL:CAZ96066.1}; EC=4.2.2.- {ECO:0000313|EMBL:CAZ96066.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 656.0
  • Bit_score: 543
  • Evalue 2.90e-151
Polysaccharide lyase, family PL12 n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L5A0_ZOBGA similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 656.0
  • Bit_score: 543
  • Evalue 2.00e-151

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Taxonomy

Zobellia galactanivorans → Zobellia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1983
ATGCATAAATTGAATTGGTATTTAGCGAGACTAAGCACTATGTCTATTCCGGAATTGGGATACAGAGCGGGTCAGTTTTTTCAAAAAAAAACTGAGAAAAGATCAAAAAGGAATGTCTTATCCGGCGCGAAAGACTGGTGTGAAATTTTCAGGAGGTCATTGGATGCTTCCCTCTCAAATAAAAGTTGTTTTACGATCCCTGCCGGTTATCTGAAAGAATTTCAACAGTATACAACATTTAGCTTTTTTACTTTTCAGATAGATGTGGATAAGCCCATTGACTGGCACCTGGACATCAGCTCCGGCAAAAAGTTTCCTCTCATTTTTTCCAAAGACATAGATATCAGATCTGATAAATATGGCTCAGCAAAAGTGGTATGGGAGATCAACCGGCTGCAGTTTTTATTGCCCATCGCCATAAAATACCGGGGGTCAAAAGATAAAAGAGATCTGCAGTTATTCACAGATATTCTGCAGAGCTGGATAGCAGGCAACTCCTACCTTTTAGGTGTAAACTGGTACAGTAACATAGAGGTAAATATCCGCCTGATCGTATGGTATTACTGCTGGCAGGTATTGTTCACGATGGAAGAAGTGAGAAACAATAAGGATTTTGTTTCATTTGCTACAGATATCTGGCTGCCTGCCATTTATGAGCATTGTGTGTACAGCTATGCAAACCCTTCTAAATACTCTTCCGCCAACAATCACCTGATAGCTGAGTATTCCGGGTTGTTTATTGCCTCCTGCTGCTGGGATTTTAATGCATCAAAGAAATGGAGAGCTTATGCTGCAAAAGGGCTTGAAAAACAGATACAGGCGCAACACTCGCCAAACGGGATCAATAAAGAAGAAGCTGCAGAATATATCCAGTTCATTACCGACTTTTTTTTGTTGCCGTTCAGCGTCGGCCGGCAACATAATTATATTTTTTCCGGTGAATATGAAAACCGGCTAAAGGCAATATTTGAGTATATCTATGCCCTGATGGACATAAAAAAAGGCTATTGTAAATACGGGGATGAGGATGACGGTAAAGTATTGATCACATCGGCAGATCCTCATTCTAATAATTTTTTTTCGCTACTTGCGTCAGCTTCTGTAATTTTAAAGGATAATAGATTCAAATCCTTTGCAGGTGGTGATTTTGATCTGAAAAACTGGTTGCTGTGGGGTGAGAATGGCCGGAAAATATTTGATGCATTGAAAACCGACAGGCGTCTGCGTCCATCCTCGTTGTATGATGAAGGTCATTTCATATTCAGAAAAGAAGATACAAGTACGCCGGTGAGGGAGATTTACCTGCACTTTGATGCAGCTCCCTTAGGATTTTTGTCTATTGCAGCGCATGGTCACGCAGATGCATTGTCAATTGCATTACATTTGGACGGAATTCCATTTATAACGGATGTGGGAACATATACCTATCATACGGAAGAGCAATGGAGAAATTATTTTGTTTCAACCCTGGCACATAATACAGTATGCATTGACTACAAAAACCAGGCGCTGCACGCCGGACCCACTATGTGGCTCAATCATTACAAAGTGACTGTAGAAAAAATCCATAAGGACGAAAATATTGAAGCTGTGGCCGCCAGTCACAACGGGTATTTGAGATCAGGTTGTAAGCATACAAGAAAAGTCAGCTTTTTCAGAAATGAGGACAAATTTCTCATTGAAGACCATATTGCAGTTTTTAAGGGGGAACATGAAATAGTTCTCCCATGGCATTTGTCCCCGGGTATTGAGGTGTTAAAGGTATCAGACAATGCTTATGAGCTGAGATCGGAAGCCTGTGACAGGTTTTGCACCTTAATTTGTGATATTCCGCTGAATACAGTGTCGGGTCAAACAGACCCGGTTTTGGGGTGGTATTCACCTTCCTTTATGCAAAAAACACCCACCCGGGCACTTATCGGAACGATAAAAAACAAAGGACTGAAAGAGATCATTATAAAATCCACTATTAATATTAATTAA
PROTEIN sequence
Length: 661
MHKLNWYLARLSTMSIPELGYRAGQFFQKKTEKRSKRNVLSGAKDWCEIFRRSLDASLSNKSCFTIPAGYLKEFQQYTTFSFFTFQIDVDKPIDWHLDISSGKKFPLIFSKDIDIRSDKYGSAKVVWEINRLQFLLPIAIKYRGSKDKRDLQLFTDILQSWIAGNSYLLGVNWYSNIEVNIRLIVWYYCWQVLFTMEEVRNNKDFVSFATDIWLPAIYEHCVYSYANPSKYSSANNHLIAEYSGLFIASCCWDFNASKKWRAYAAKGLEKQIQAQHSPNGINKEEAAEYIQFITDFFLLPFSVGRQHNYIFSGEYENRLKAIFEYIYALMDIKKGYCKYGDEDDGKVLITSADPHSNNFFSLLASASVILKDNRFKSFAGGDFDLKNWLLWGENGRKIFDALKTDRRLRPSSLYDEGHFIFRKEDTSTPVREIYLHFDAAPLGFLSIAAHGHADALSIALHLDGIPFITDVGTYTYHTEEQWRNYFVSTLAHNTVCIDYKNQALHAGPTMWLNHYKVTVEKIHKDENIEAVAASHNGYLRSGCKHTRKVSFFRNEDKFLIEDHIAVFKGEHEIVLPWHLSPGIEVLKVSDNAYELRSEACDRFCTLICDIPLNTVSGQTDPVLGWYSPSFMQKTPTRALIGTIKNKGLKEIIIKSTININ*