ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_46111_17

Organism: 2019_SCN_bioreactor_200211_biofilm_Bacteroidetes_44_168

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(19198..22074)

Top 3 Functional Annotations

Value Algorithm Source
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 959.0
  • Bit_score: 1638
  • Evalue 0.0
carbamoyl phosphate synthase large subunit n=1 Tax=Niabella aurantiaca RepID=UPI0003613024 similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 959.0
  • Bit_score: 1602
  • Evalue 0.0
carbamoyl phosphate synthase large subunit similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 959.0
  • Bit_score: 1598
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2877
ATGCCTAAAGACAACTCTATCAAGACCGTGCTGATTATTGGCTCCGGTCCTATTATCATCGGACAAGCATGTGAATTTGACTATTCAGGAACCCAGGCTGCCCGAAGCTTACGCGAAGAAGGGATCAAAGTCATCCTGATCAACAGCAATCCCGCTACCATTATGACCGACCCCATGATGGCCGACAGGGTATACCTGCTGCCGCTTACCGTGGAAAGCATTGAGCAGATACTGGAAGAAAACCAGATAGATGCCGTATTGCCCACCATGGGGGGACAAACCGCCCTTAACCTTGCGAAGGAAGCGCAGGAGCTGGGTGTTTGGGAAAAATATAACGTGCGCCTGATCGGCGTGGATATCAAGGCGATAGATAAAGCAGAAGACAGGGAGCGTTTCCGCCAGTGGATGATCCGGCTTGGCATACCGGTAGCTCCTGCCAAGACAGCCAACTCTTTCCTGGAAGGAAAGGAATTTGCCCAGGAAATTGGTTTCCCGCTGGTTATCCGCCCCTCCTATACGCTCGGCGGTACCGGCGGAGGGTTTGTGCATGGCAAAGAGCAACTGGATGAAGCGCTGAACAGGGGCCTATCCGCCTCTCCCATACATGAGGTGCTGGTAGAAAAAGCGGTGCTCGGATGGAAAGAATTTGAGCTGGAGCTGCTGCGCGATGCCGCCGACAATGTGGCTATCATCTGCACGGTAGAGAATTTTGACCCGATGGGCGTGCATACAGGCGACTCCATCACTGTAGCGCCCGCCATGACGCTCAGCGATACTGCTTTTCAGCTGATGCGCAATACCGCCATCCGCATGATGCGCGATCTCGGCAACTTCGCGGGCGGATGTAACGTGCAATTTGCGCTGAATCCTTCCACGGAGGAGATCATTGCAATAGAGATCAACCCGCGCGTGAGCCGCTCTTCCGCGCTGGCTTCCAAAGCAACGGGATACCCTATTGCCAAAATTGCCGCAAAGCTGGCGATTGGCTATAACCTAGATGAGCTTAAAAACCAGATCACACAATCCACTTCTGCATATTTTGAACCTACTTTAGACTATGTGATCGTAAAAGTGCCGAGATGGAATTTTGATAAATTCAAAGGCGCCAATGATACCCTGGGGCTCCAGATGAAATCCGTGGGAGAGGTAATGTCTATCGGGCGCAACTTTACGGAAGCGCTTCAAAAAGCATGTCAGAGCCTGGAAAACGAAGCGGTAGGATTAGGATATTATGGCAAAAGCATGATGCGTGCGGAAGAGATCGTGGAATATCTCAAAACACCGAAATGGGACAGGCTGTTCAGGATAAAAGACGCGCTTATGATGGGCGTAAGCGTTAAATCTATATGCGAGGCTACCCGTATTGACCGCTGGTTCATATACCAGATACAGGAGATCGCAAACCTGGAAAAGAAAATTGCGGAGTACAACCTGCAGACCCTGCCCGACCAGCTGCTCATTGAGGCAAAGCATAATGGTTTCAGCGATGAGCAGATATGCAGGATCATGAAAGACGGCTCAAAAGATGAGGATATATATGAGCGCAGGAAAAAGATAGGGCTCACACGCGTGTATAAGATGGTGGATACCTGCGCTGCCGAGTTCGAAGCCAAGACGCCTTATTTCTATTCCAGCTTTGAAGCGCCTTCTGTCCCCAACGCAGCTAAGGATGCTGTTGTACATAACGAAAGCATTGAATTCAACTCCAAAAAAGGAGACAGCTCCAAAGGCTCGGTCATCGTGCTCGGCTCGGGGCCTAACCGCATTGGGCAGGGCATTGAATTTGACTACTGCTGTGTGCACGGGCTGATGGCCATTAAAGAATCCGGTTATAAAGCCATCATGGTGAATTGTAACCCCGAAACGGTTTCCACCGACTTTGATATTGCCGATAAATTATATTTCGAACCGGTATTCTGGGAGCACCTGTGGGAGATCGTAGAACATGAAAAACCGGTTGGCGTAATTGTGCAGCTTGGCGGGCAAACCGCGTTGAAGCTTGCAAAGCGCCTCCACGAAAAAGGCATACGGATCATCGGCTCCTCTTTTGACAGCATGGACATCGCCGAAGACAGGGGGCGATTCAGCGACCTGCTGAGGGATCTGAATATTCCGTATCCCAAATACGGCACTGCATATAATACCGATGAGGCGATAGAAGTAGCCAAAGAAGTAGGCTATCCGGTTCTCGTCCGCCCGAGCTATGTACTGGGAGGGCAGCGGATGCGGATTGTGCTGAATGACGAAGAGCTGGAAAAAGGCGTATTAAGCCTGCTGAAGCATCTCCCGGGAAATAAAATACTGATCGATCATTTCCTCGACCGCTGCCAGGAAGCTGAGGTAGACGCTATCTATGATGGCGAGACCTTCCACGTGATGGGCGTGATGGAGCATATTGAGCCTGCGGGCATACACAGCGGCGACAGCAATGCGGTACTGCCTGCATTCAACCTTAGCCCCATGGAAGTGACCACTATGGAGTTTTACGCCGAAAAAATAGCCCGGGCCCTTGATATACGCGGGCTGATCAATGTCCAGTTTGCTATCAAAGACGGCACTGTATATGTAATTGAAGCCAATCCCAGGGCGTCCCGCACCACCCCGTTCATTGCAAAAGCATACCAGATCCCTTATCTCAATATTGCTACCAGGGTAATGCTGGGCGAGGTAAAATTAAAAGACCTCAGCTTTAAAAAGAACCTGAAAGGGTTTGCCATCAAAGAACCGGTATTCAGCTTTGACAAGTTCCCGGGAGTAAATAAGGAGCTGGGGCCTGAAATGAAGTCAACCGGCGAAGCCATACGGTTCATTAAAGACCTGCGTGATCCTTACTTCCGCACATTGTATAAGGAAAGAAGCATGCACCTGAGCAAATAA
PROTEIN sequence
Length: 959
MPKDNSIKTVLIIGSGPIIIGQACEFDYSGTQAARSLREEGIKVILINSNPATIMTDPMMADRVYLLPLTVESIEQILEENQIDAVLPTMGGQTALNLAKEAQELGVWEKYNVRLIGVDIKAIDKAEDRERFRQWMIRLGIPVAPAKTANSFLEGKEFAQEIGFPLVIRPSYTLGGTGGGFVHGKEQLDEALNRGLSASPIHEVLVEKAVLGWKEFELELLRDAADNVAIICTVENFDPMGVHTGDSITVAPAMTLSDTAFQLMRNTAIRMMRDLGNFAGGCNVQFALNPSTEEIIAIEINPRVSRSSALASKATGYPIAKIAAKLAIGYNLDELKNQITQSTSAYFEPTLDYVIVKVPRWNFDKFKGANDTLGLQMKSVGEVMSIGRNFTEALQKACQSLENEAVGLGYYGKSMMRAEEIVEYLKTPKWDRLFRIKDALMMGVSVKSICEATRIDRWFIYQIQEIANLEKKIAEYNLQTLPDQLLIEAKHNGFSDEQICRIMKDGSKDEDIYERRKKIGLTRVYKMVDTCAAEFEAKTPYFYSSFEAPSVPNAAKDAVVHNESIEFNSKKGDSSKGSVIVLGSGPNRIGQGIEFDYCCVHGLMAIKESGYKAIMVNCNPETVSTDFDIADKLYFEPVFWEHLWEIVEHEKPVGVIVQLGGQTALKLAKRLHEKGIRIIGSSFDSMDIAEDRGRFSDLLRDLNIPYPKYGTAYNTDEAIEVAKEVGYPVLVRPSYVLGGQRMRIVLNDEELEKGVLSLLKHLPGNKILIDHFLDRCQEAEVDAIYDGETFHVMGVMEHIEPAGIHSGDSNAVLPAFNLSPMEVTTMEFYAEKIARALDIRGLINVQFAIKDGTVYVIEANPRASRTTPFIAKAYQIPYLNIATRVMLGEVKLKDLSFKKNLKGFAIKEPVFSFDKFPGVNKELGPEMKSTGEAIRFIKDLRDPYFRTLYKERSMHLSK*