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berkeley_reactor_200306_biofilm_scaffold_46111_19

Organism: 2019_SCN_bioreactor_200211_biofilm_Bacteroidetes_44_168

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(23695..24474)

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCA6_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 259.0
  • Bit_score: 412
  • Evalue 1.60e-112
short chain dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 259.0
  • Bit_score: 412
  • Evalue 4.60e-113
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACU59489.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 259.0
  • Bit_score: 412
  • Evalue 2.30e-112

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 780
ATGGATCTGAATCTTTCGAACAAGGTTTTTATAGTGACAGGCGGGGCCAAAGGAATAGGCGCTGCCATAAGCAAAACAATTGCCGAAGAAGGCGGGATAGCAGTAGTGGTGGGAAGAGGCAAAGCAGATAATATTAAAATAACAGATGAAATTATAAAATCAGGCGGGAAGGCAAGCTATGTTACTGCTGAGCTGGGCACTCCTGCCGCCTGCAGGGAAGTAATTGATTTTACTTCGGAAAAATACGGGAGGATTGACGGGCTGGTAAATAATGCGGGGATCAATGATGGGGTAGGGCTGGAGAAAGGGTCGCCTGAAAAATTCTTTGAATCGCTGCACAAAAACCTGAGCCACTATTATAACCTCGCCCACTATGCGCTGCCCTTCCTGAAACAATCAAAGGGCAATATTGTGAATATAGGGTCGAAGGTGGCGGTTACCGGGCAGGGTAACACCTCGGGATATGCTGCTTCAAAAGGCGCTATCAATGCGTTGACGCGCGAATGGGCGGTAGAGCTGCTGCCTTATTCCATCAGGGTGAACACCGTGCTCCCGGCTGAAGTATGGACTCCCCTGTATGAAAACTGGATCAACAGCCTGCCCAATCCCAAAGAGAAGCTGGAGCAGATCGTGGCTAAGATCCCTTTTGAGAAGAGAATGACCACTGCTGAAGAGATTGCGGATATGACCGTTTTCCTGCTCAGCAGCAGGTCAAGCCATACTACAGGACAGATCTTGTTTGTGGACGGCGGATATACCCATCTCGACAGATCATTGTAA
PROTEIN sequence
Length: 260
MDLNLSNKVFIVTGGAKGIGAAISKTIAEEGGIAVVVGRGKADNIKITDEIIKSGGKASYVTAELGTPAACREVIDFTSEKYGRIDGLVNNAGINDGVGLEKGSPEKFFESLHKNLSHYYNLAHYALPFLKQSKGNIVNIGSKVAVTGQGNTSGYAASKGAINALTREWAVELLPYSIRVNTVLPAEVWTPLYENWINSLPNPKEKLEQIVAKIPFEKRMTTAEEIADMTVFLLSSRSSHTTGQILFVDGGYTHLDRSL*