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berkeley_reactor_200306_biofilm_scaffold_46111_25

Organism: 2019_SCN_bioreactor_200211_biofilm_Bacteroidetes_44_168

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 28021..31482

Top 3 Functional Annotations

Value Algorithm Source
Methylmalonyl-CoA mutase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMM2_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 1114.0
  • Bit_score: 1573
  • Evalue 0.0
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:KIC94705.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 1127.0
  • Bit_score: 1592
  • Evalue 0.0
methylmalonyl-CoA mutase similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 1114.0
  • Bit_score: 1573
  • Evalue 0.0

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3462
ATGAGAAGAGAGACGATAAACGTTAAGTGCTCACATTTATCGTCTGTCGTTTCACGCTTAACATCACAACAGGAACTAACGCACATTAGTTTTTGCCTACCTTTACAGTATCCGATTGCCATGGACCATGCTATATCAAAAATACGGATCGTAACTGCCGCCAGCTTATTCGACGGGCACGATGCTGCCATCAATATCATGCGCCGGATATTGCAGAGCAAAGGAGCGGAAGTCATTCACCTGGGGCATAACCGCTCTGCGAAGGAAATTGTGGAATGCGCCATTGAGGAAGATGCAAATGCAGTAGCAGTTACCAGCTACCAGGGAGGTCACATAGAATTTTTCAAATATATTAAAGACCTGCTGCAGGAAAGCGGCTGTGGTCATATCCTGATCTTCGGCGGTGGCGGCGGCACTATCCTGCCCGAAGAGGCAAAGCTCCTGGAGGACTATGGTATAGCCAGGATCTACAGCCCCGACGACGGCAGGCGGATGGGACTGGAAGGGATGATAATGGATGTACTGGATAAAATTCAGCAAAACATAAGTCAATATCTGCGCCCATTAGATACTTCATGGCGCATTCCTCCCTTAGGTGAAAGAACAGATATAAGAAAGACTGCAAGAGCGATAACGCTCGCAGAGAACAATATGCCGTATGATGCCCTGCTGCCTGCAACACTTATTCGCGCTACTGTGCCGGTGATCGGGATAACGGGAACCGGTGGGGCAGGTAAGTCTTCGGTAACCGATGAAATAGTAAGACGATACCTCAGGAGTTTCCCGGAAAAGATCATTGCGGTATTATCGGTAGACCCCAGCAGGAGAAAAACAGGAGGCGCATTGCTGGGCGACCGCATCAGGATGAACGCAGTAGCGCATCCCCGCGTATATATGCGCTCGCTGGCAACACGGGAAGACAATACCGCTCTGAGTAAAGCCGCCAAGGAAGCCATTGCTGTCTGCAAACGATCAGGCTATGACTGCATCCTCCTGGAAACCGCTGGTGTGGGGCAGGGTGATATAAGCATAACAGACCACTGTGATGTGAGCATATATGTAATGACGCCGGAATACGGCGCAGCTTCGCAATTGGAAAAGATCAATATGCTCGATTATGCAGATATCGTCGCGGTAAACAAGTTTGACAAGCCCGGCGCCCTGGATGCGCTGGCAGATGTGAGAAAGCAATATAAGAGAAACCACCTGCTGTTCTCTGCAAAGGATGAAAACCTCCCGGTATCAGGCGTTTGCGCCAGCAGGTTCAACGACCCGGGAATAAATGCCTTGTTTGATCTGCTGGTACAAAAAATTGAGAACAAGCTACATACCGGCTGGCGCTATACTTCCCCTGCGGTAACTGCTGAAGCGAAGCATCCTGCAGTGATCCCACCTGCCAGGATCCGTTACCTGGGAGAGATCAATGAAACGATCCGGCAATATGATCGCCGGGTGCATGAACAAAGCGCCATCGCTACCAGCCTGTACCGGCTAAAGGGTGCAATGGAAATACTGGATGATATTCCCGGATCCCTGGATGAAAAATACCGGGAGCTCAAAACACAATTAGACCCGGAATGCGAAAAGCTTATTGAAAGCTGGGAAACAGTTAAAAAGAAATACACAGCAGGCTATCTCGAATACCATGTACGGGACAAAGTGATCCGGCAGCCATTATCCACGCAATCATTGAGCGGTATCGGCATTCCCAAAATTGTATTGCCTGCATACAAAGACTGGGGCGATATATTGAAATGGCAGTTGCAGGAAAACGTACCCGGCTCTTTTCCCTATACTGCAGGGGTTTTTGAATTGAAGCGCACGGGCGAAGACCCTACAAGAATGTTTGCAGGAGAAGGTGGTCCCGAAAGAACGAATAAACGGTTTCATTATGTGTCGAAAGACGAACCGGCAAAACGCTTATCCACAGCTTTTGACAGTGTGACACTATATGGAGAAAATCCTGACCGCCGCCCTGATATATACGGGAAAATCGGGAATGCCGGCGTAAGCATTGCCACGGTGGACGATGCCAAAAAGCTGTACAGCGGCTTTGACCTCTGCGACCCTTCCACATCTGTAAGCATGACCATCAACGGGCCCGCTCCGGTGCTCCTTGCCTTTTTTATGAATGCGGCCATAGATCAGCTTTGCGAAAAATGGATTAAAGAGCATAGGTATCAGGCAACCTCCGAAGCAGTAAAAAAGAGCAGGTATCAGGAGCAGGCGCCGCCACAATACGGCACTGCATTACCTGAAGGAAACAATGGTCTGGGGCTGCAATTGCTGGGATTATCAGGAGATGAGGTTGTTCCCCCTGAAGTATACAGATCCCTCAAAGCAAAAGCCCTTCAGCAGGTGAGAGGTACGGTGCAGGCTGATATCCTGAAAGAAGACCAGGCACAGAATACCTGCATCTTCTCTACCGAATTTGCATTGAAGCTGATGGGCGATGTGCAGGAATATTTTATTGAAAACAAAGTCCGGAATTTTTACAGCGTAAGTATCAGCGGTTATCATATTGCAGAGGCGGGAGCCAACCCTGTTACACAGCTTGCATTTACGCTTGCCAACGGTTTTACTTATGTGGAGTATTATCTCAGCCGTGGTATGCATATTGATGATTTTGCTCCTAATCTTTCCTTCTTTTTCAGCAATGGCATAGATCCCGAATACAGTGTAATAGGAAGAGTGGCAAGGAGGATATGGGCAAAAGCCATAAAATACAAGTATAAGGGCAATGAGCGTTCTCAAAAGCTGAAATATCATATTCAAACCAGCGGCAGGAGCCTGCATTCGCAGGAAATAGCTTTTAACGATATACGCACCACCCTGCAGGCGTTGTATGCCATATACGACAATTGCAATTCGCTCCATACCAATGCCTATGACGAAGCCATAACCACCCCTACCGAAGAAAGTGTGCGGAGGGCTATGGCTATACAGCTTATCATCAACCGGGAGCTGGGCTCGGCAAAAACCGAGAACTTCATCCAGGGCAGCTTTGCCATAGAGACCTTAACTGATCTTGTGGAAGAAGCGGTAATGATGGAATTTGAGCGGCTGAACGAGAGGGGCGGGGTGATGGGAGCAATGGAAAGAATGTACCAGCGCAACAAGATACAGGAAGAAAGCCTGCACTATGAGCAGCTCAGGCACAGCGGGGAACTGCCGATAGTGGGGGTGAATACTTTTCTTAATAAAAAAGAATCGCATACCGTGATCCCCGGCGAGGTAATAAGAAGCACTGCTGAAGAAAAGGAGCAACAAATAGAGAACCTGCTGCATTTTCATAAAAGAAACGAAGGCAGGGCCTGCGAAGCTTTACAAAAGCTGAAGGAAACGGCTATGAGTAACCGAAATATATTTTCGGAACTGATGCATACCGTGAAGTATTGTTCGCTCGGGCAGATCACCCATGCGCTGTATGAAGTGGGCGGGCAATACAGGAGAAACATGTAG
PROTEIN sequence
Length: 1154
MRRETINVKCSHLSSVVSRLTSQQELTHISFCLPLQYPIAMDHAISKIRIVTAASLFDGHDAAINIMRRILQSKGAEVIHLGHNRSAKEIVECAIEEDANAVAVTSYQGGHIEFFKYIKDLLQESGCGHILIFGGGGGTILPEEAKLLEDYGIARIYSPDDGRRMGLEGMIMDVLDKIQQNISQYLRPLDTSWRIPPLGERTDIRKTARAITLAENNMPYDALLPATLIRATVPVIGITGTGGAGKSSVTDEIVRRYLRSFPEKIIAVLSVDPSRRKTGGALLGDRIRMNAVAHPRVYMRSLATREDNTALSKAAKEAIAVCKRSGYDCILLETAGVGQGDISITDHCDVSIYVMTPEYGAASQLEKINMLDYADIVAVNKFDKPGALDALADVRKQYKRNHLLFSAKDENLPVSGVCASRFNDPGINALFDLLVQKIENKLHTGWRYTSPAVTAEAKHPAVIPPARIRYLGEINETIRQYDRRVHEQSAIATSLYRLKGAMEILDDIPGSLDEKYRELKTQLDPECEKLIESWETVKKKYTAGYLEYHVRDKVIRQPLSTQSLSGIGIPKIVLPAYKDWGDILKWQLQENVPGSFPYTAGVFELKRTGEDPTRMFAGEGGPERTNKRFHYVSKDEPAKRLSTAFDSVTLYGENPDRRPDIYGKIGNAGVSIATVDDAKKLYSGFDLCDPSTSVSMTINGPAPVLLAFFMNAAIDQLCEKWIKEHRYQATSEAVKKSRYQEQAPPQYGTALPEGNNGLGLQLLGLSGDEVVPPEVYRSLKAKALQQVRGTVQADILKEDQAQNTCIFSTEFALKLMGDVQEYFIENKVRNFYSVSISGYHIAEAGANPVTQLAFTLANGFTYVEYYLSRGMHIDDFAPNLSFFFSNGIDPEYSVIGRVARRIWAKAIKYKYKGNERSQKLKYHIQTSGRSLHSQEIAFNDIRTTLQALYAIYDNCNSLHTNAYDEAITTPTEESVRRAMAIQLIINRELGSAKTENFIQGSFAIETLTDLVEEAVMMEFERLNERGGVMGAMERMYQRNKIQEESLHYEQLRHSGELPIVGVNTFLNKKESHTVIPGEVIRSTAEEKEQQIENLLHFHKRNEGRACEALQKLKETAMSNRNIFSELMHTVKYCSLGQITHALYEVGGQYRRNM*