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berkeley_reactor_200306_biofilm_scaffold_71385_15

Organism: 2019_SCN_bioreactor_200211_biofilm_Bacteroidetes_44_168

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 18845..20494

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL22_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 542.0
  • Bit_score: 923
  • Evalue 7.90e-266
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 542.0
  • Bit_score: 923
  • Evalue 2.20e-266
ABC transporter related {ECO:0000313|EMBL:ACU63932.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 542.0
  • Bit_score: 923
  • Evalue 1.10e-265

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1650
ATGATTTCAGTGAACAATGTATCATTATCCTTTGGTAAAAGGGTATTGTTTGACGAGGTGAACCTTAGTTTCAGCAAAGGGAATTGTTATGGCGTTATCGGCGCTAACGGCGCCGGTAAGTCTACCTTTCTTAAAATACTTTCCGGCGAGATTGATCCCACGAAAGGCACCATAGACATCACACCGGGAGAACGGATGGCGGTATTACAGCAAAACCACTTTGCTTTTGATGACCATACCGCCCTGCAAACCGTGATGATGGGTCATAAAAAGCTTTGGGAGGTCATGCACGAGCGGGATGCCATATATGCCAAAGAAGATTTTACAGAAGAAGACGGTATGCGCGCCGGTGAGCTGGAAGCTGAATTCGGGGAAATGGGAGGATACACTGCTGAAAGCGACGCAGCTACCTTGCTGGGTGAGCTGGGGGTAACGGAAGATCGGCATCAAACGCTGATGAAAGACCTCCCCGGAAGCATAAAAGTGCGGATATTGCTGGCACAGGCGCTTTTCGGCAATCCTGATATCCTTATCCTGGATGAGCCTACCAACGACCTTGACGTGGAAACCATCAGCTGGCTGGAAAATTTCCTGGCTGATTATGAAAATATCGTCATCGTGGTAAGCCACGACCGCCATTTTCTTGATGCGGTATGTACCCATGTGGCAGATGTGGACCGCCAGAAAATAAAGATCTATACAGGTAACTATACTTTCTGGTACGAAAGCAGCCAGTTGGCCGCGCGGCAGATGAGCGACAAGAACAAGAAGATGGAAGAAAAGCGTAAAGACCTACTCGACTTTATTGCACGTTTCAGCGCCAATGCTTCCAAGAGCAAGCAGGCTACTTCCCGTAAAAAGGCGCTGGAAAAGCTGGTCATTGAAGAAATCGAGCCGTCTAACCGCCGTTATCCCGGCATTATTTTCAAACAGGACAGGGAACCCGGCAACCAGGTGCTGAATGTTGAAAAGCTGTCGAAGAAGGCAGATGGCGGACGGGTGCTTTTCAGTGATATCAGTTTCTCAGTGAATAAAAGCGATAAGATCGCTTTCTTTTCAAAAGACCATCTGGCGCTCACTTCCTTTTTTGAGATCATTAATGGTAACCAGAAAGCAGATGGCGGCAAATACGAATGGGGCACTACTATTACCAAAGCATATCTCCCCAATGATAATGCAGCTTTTTTCAAAGACGCAGATATTAATCTCATGGAATGGCTGCGGCAGTTTGTACCACCAACAGTGACGGATGTGGACGAGCCCTTTTTAAGAGGATTTTTAGGTAAAATGCTTTTCAGCGGGGATGAGATCCTGAAGAAAACCGGAGTACTGAGCGGGGGTGAAAAAGTAAGATGTATGATCAGCAGGATGATGATACAAAATCCCAACCTCGTAGTTCTTGATGAGCCTACCAACCACCTTGATCTTGAAAGTATCCAGGCGTTTAACGAAAGCATGGTGAATTTTAAAGGTGTTGTGCTGCTCACCTCACATGACCATACCTTTATGCAAACTGTTGCCAACCGCGTGATAGAGCTTACCCCGAAAGGCGCCATTGACAGGCTGATGACTTTTGACGAATACCTTGCAGACGACCGGGTAAAGCAGTTAAGAGAAACCATGTATGAGCCGAAGGGTATGCTGGTATAA
PROTEIN sequence
Length: 550
MISVNNVSLSFGKRVLFDEVNLSFSKGNCYGVIGANGAGKSTFLKILSGEIDPTKGTIDITPGERMAVLQQNHFAFDDHTALQTVMMGHKKLWEVMHERDAIYAKEDFTEEDGMRAGELEAEFGEMGGYTAESDAATLLGELGVTEDRHQTLMKDLPGSIKVRILLAQALFGNPDILILDEPTNDLDVETISWLENFLADYENIVIVVSHDRHFLDAVCTHVADVDRQKIKIYTGNYTFWYESSQLAARQMSDKNKKMEEKRKDLLDFIARFSANASKSKQATSRKKALEKLVIEEIEPSNRRYPGIIFKQDREPGNQVLNVEKLSKKADGGRVLFSDISFSVNKSDKIAFFSKDHLALTSFFEIINGNQKADGGKYEWGTTITKAYLPNDNAAFFKDADINLMEWLRQFVPPTVTDVDEPFLRGFLGKMLFSGDEILKKTGVLSGGEKVRCMISRMMIQNPNLVVLDEPTNHLDLESIQAFNESMVNFKGVVLLTSHDHTFMQTVANRVIELTPKGAIDRLMTFDEYLADDRVKQLRETMYEPKGMLV*