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berkeley_reactor_200306_biofilm_scaffold_133894_30

Organism: 2019_SCN_bioreactor_200211_biofilm_Bacteroidetes_44_168

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 40673..41860

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035D3DA2 similarity UNIREF
DB: UNIREF100
  • Identity: 41.8
  • Coverage: 395.0
  • Bit_score: 296
  • Evalue 2.60e-77
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:EHQ25197.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 400.0
  • Bit_score: 288
  • Evalue 1.30e-74
FecR protein similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 408.0
  • Bit_score: 285
  • Evalue 1.30e-74

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Taxonomy

Mucilaginibacter paludis → Mucilaginibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1188
ATGGAAGAATTAGACGAAAGAATCTACTATCTGATGGATCGCCTTTTCAGCAACAACTGCACACAGGCGGAAAAAGAAGAACTGGCTTATTGGATAGAAAAAGCACAAGACGATTCAAAGCTGAGACGCTATTTGTCGGAAATGTGGAACCGCTTTGAACCTTTGGAAGACATGTCCGAAGAAAAAGCAAACTACCTGTTTAGTTCTGTTACCAGAGCCAACACACCTGCAATGCTTCGGTCAAAATTTAAAAACAGGTATTTGCTGTTTTCCGGGATAGCTGCGGCTTGTATTTTGATCATTATCAGCGTAGGTTATATTTTCTTCCGGGATTCAAAAAACAACGAGATCTCCTCATTTGCCGATAAACCGCACAAGATTATAAATGATGCTGCGCCGGGACAGTTTAAAGCCGTATTAACCCTGTCTGATGGTTCCCAGGTTGTATTAGACACCGTTCAGGACCAGATGATCGCACAGGAAGGAAGCGCACAGGTAAACAATTCGAACGGCCACCTTTATTATAACAGCTCTGCCGAAGAAAAAAAAGAAATACTTTATAATACACTTGCTACCAACAGGGGAGAACAATACTCCATGACGCTGGCTGACGGAACAAAACTCTGGCTGAATGCGGCATCTTCTATCCGGTTCCCCGTAGCATTTACCGGCAGCTACCGCGACGTGGAAATTACCGGGGAAGTGTATTTTGAAGTAGCCCACAATAAAGAAAAGCCCTTCAGGGTAAAAGCAGGAGACGAGCATATTGAGGTATTAGGAACGCATTTCAATGTTAATGCATATCACGATGAACCTTTTATACGCACTACGTTGATCGAAGGATCAGTCAAAGTAAACCGTGGTACTTCAAGCGCTTTGCTTAAGCCAAATGAGCAGGCCCTTGTAAAAAACGGCAACACTGCCATCAATGTTTCTCCCGCAGACGGTCAGGCTGCTATTGCATGGAAAAGCGGCTACTTTAAACTGACCAATAGCGAGGTGTCCGACATTATGCGGCAGATAGCAAGATGGTACGATATAGAAGTAGTCTACAAAGGAAATGTTACGTCCGGAACCATTTCGGGTGAAGTGCCAAGAAACCTTAACTTATCGGAAGTGCTGAAAGTGCTGGAATTAAGCGATGTGCATTGCAAACTGGAAGGAAAAACACTGATCGTTACTAACTAG
PROTEIN sequence
Length: 396
MEELDERIYYLMDRLFSNNCTQAEKEELAYWIEKAQDDSKLRRYLSEMWNRFEPLEDMSEEKANYLFSSVTRANTPAMLRSKFKNRYLLFSGIAAACILIIISVGYIFFRDSKNNEISSFADKPHKIINDAAPGQFKAVLTLSDGSQVVLDTVQDQMIAQEGSAQVNNSNGHLYYNSSAEEKKEILYNTLATNRGEQYSMTLADGTKLWLNAASSIRFPVAFTGSYRDVEITGEVYFEVAHNKEKPFRVKAGDEHIEVLGTHFNVNAYHDEPFIRTTLIEGSVKVNRGTSSALLKPNEQALVKNGNTAINVSPADGQAAIAWKSGYFKLTNSEVSDIMRQIARWYDIEVVYKGNVTSGTISGEVPRNLNLSEVLKVLELSDVHCKLEGKTLIVTN*