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berkeley_reactor_200306_biofilm_scaffold_9141_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(12781..14430)

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat-containing protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMI7_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 524.0
  • Bit_score: 595
  • Evalue 3.70e-167
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 524.0
  • Bit_score: 595
  • Evalue 1.10e-167
TPR repeat-containing protein {ECO:0000313|EMBL:ACU58531.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 524.0
  • Bit_score: 595
  • Evalue 5.30e-167

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1650
ATGAAATATTTGTGTAATATATGTGGCCGGGGAGCAGTCCTGGTCATTGTTCTTATTTTATCCCTTACCGGAAAGGGGCATACGCAGGAGAACGATCGTTCTGAGCTGGCGTATGCCCAGCGACTGAGCCAACAGTTCCCGGACAGTGCATTCCTATTGCTAAAGGAAATGTACAGTCAGTCCCTGGCGAAGAAAGACAGGATCGCCATGGCCACCTGTCTGCAGCAGATGGGAGAGATCTGTTACTACCTGGGCAATTATCCCCAGGCCCTGGACTTCCATTTACAGGCGGACAAGATCTTTCGGGAGGGGGGGCATCGGGAGCAGATAGCCGCCAACCTGGATGATATGGGAATCCTGTATTATTACAACCGGCAGCTGACCATGGCCCGCAAACAGTATGATGAGGCGCTGAATTTATATAGCCAGGCAGGCAATAGTGAAGGGGTGGCGAATACGTATGGGAAGATCGGGCATCTGTACGAGAAGCAACAAAAATATGACAGCGCCTTTTTTTATCAGCGCCAGGCTTTACTGCAATATCAGCGGATCTCCCATAAGCAGGGAATGGCCAAGATCTATGAGAATATGGGCAGCATCTTCGAAGACCTGCAACAGTACGATTCTTCAAAATATTATTTTACCAATGCCCTTCAGCTGTATGATCAGTCGGGGGAACGGGTTGCCAGCATCGAAGTGGTCAATAACCTGGGGGATATCCTTCGTAAGACGGGGCATTACCAGGAGGCGATAGCCCAAACCAATAAGGCGTTGGAACTGTCTACGCGGACCAATGACCTGTATGAGAAGGGAGCTGCATACAGAGACCTGGGAAAAGCGTATCATTTATTGGGCAAGGAGGATAGCGCCTATCGATATCTCGAACTTTCGCGGCGGGCTACCCTGGATATCTATTCCAGGGAGAACAACAGACAGACGGCATTCCTCAGCGTACTATTCGACATCGATAAGAAGAATGATGAGATCGTCAGGCTGGAGAATGCCCGTAAGATCACCGTTATTACCACCGCTGCCGTGATCATTGTGGTCATCCTGCTCATCGTACTGGGGGCGGTGATCATCAGCCGGCAGCGACTGAAGATCCGGAATGAGCGACTGACAAGCGAACAGGACCGGCAGATATATATTACGCAGCGGGAATTGATGCAGGCCGAGCTACAGAACCGTCACCTGCAGGAAGAAAGGCTGATGCAGGAACTGGAAGTAAAGCGAAAGGGGTTGACCAGTAGTACCCTACACGTTATTCAAAAGAACCAGCTGCTGGAAAACCTGCGGGACAGGCTCGCCGTCCTGGTAAAGGATGATAAACGGGACCAGAAAAAGCAGCTGCAGCAGCTGATACAGCAGATCAATCTCAACTTCAACCACGATCAATACTGGAATGAGTTCCGGGAGACTTTTGGCCAGGTCCACCAGCAATTTTTCGACAACCTGAAGAGCCGGAGCGAGGAGCTCACGGGAAATGATCTCCGGCTTTTGTCACTCATCAAGCTGAATCTCGCCTCCGGGGATATCGCCACCTTGCTAGGCATTTCACAGGATAGTCTGAGGGTGTCACGTTACCGGCTGAAGAAGAAGCTGTGTCTTAATAATGGGGAGAGCCTGACGAGCTTTGTGCAGTCTTTATGA
PROTEIN sequence
Length: 550
MKYLCNICGRGAVLVIVLILSLTGKGHTQENDRSELAYAQRLSQQFPDSAFLLLKEMYSQSLAKKDRIAMATCLQQMGEICYYLGNYPQALDFHLQADKIFREGGHREQIAANLDDMGILYYYNRQLTMARKQYDEALNLYSQAGNSEGVANTYGKIGHLYEKQQKYDSAFFYQRQALLQYQRISHKQGMAKIYENMGSIFEDLQQYDSSKYYFTNALQLYDQSGERVASIEVVNNLGDILRKTGHYQEAIAQTNKALELSTRTNDLYEKGAAYRDLGKAYHLLGKEDSAYRYLELSRRATLDIYSRENNRQTAFLSVLFDIDKKNDEIVRLENARKITVITTAAVIIVVILLIVLGAVIISRQRLKIRNERLTSEQDRQIYITQRELMQAELQNRHLQEERLMQELEVKRKGLTSSTLHVIQKNQLLENLRDRLAVLVKDDKRDQKKQLQQLIQQINLNFNHDQYWNEFRETFGQVHQQFFDNLKSRSEELTGNDLRLLSLIKLNLASGDIATLLGISQDSLRVSRYRLKKKLCLNNGESLTSFVQSL*