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berkeley_reactor_200306_biofilm_scaffold_29408_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(156..560)

Top 3 Functional Annotations

Value Algorithm Source
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 130.0
  • Bit_score: 208
  • Evalue 4.40e-51
Putative Holliday junction resolvase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI76_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 130.0
  • Bit_score: 208
  • Evalue 3.10e-51
Holliday junction resolvase similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 130.0
  • Bit_score: 208
  • Evalue 8.90e-52

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 405
ATGGCCATCGATTACGGATTGAAACGAACGGGTATCGCCGTTACAGACCCCCTGCAGATCATCGCCAGCGGCCTCACCACCGTGGAATCGCCGAAAATAATAACGTTTCTGAAAGATTATTTCAAAAAGGAAACGGTCGAGCTCCTGCTGGTAGGCGAACCCAAGAACTGGGACGACACGGACACGCATGCCACTCCCCTCGTCAGGGATTTTATCACCAGGCTGAAAAAGGAGTTTCCCACCATGCCCATCCGGATGGTCGATGAGCGATACACTTCTAAAATGGCTTCAAGGGCCATGATCGATATGGGGCTAAAGAAGCACCAGCGGCGTAACAAGGCGCTCGTAGATGAAATAGCCGCCACTATTATGTTACAGGAATACATGGAAAGGAGCGACAAATAA
PROTEIN sequence
Length: 135
MAIDYGLKRTGIAVTDPLQIIASGLTTVESPKIITFLKDYFKKETVELLLVGEPKNWDDTDTHATPLVRDFITRLKKEFPTMPIRMVDERYTSKMASRAMIDMGLKKHQRRNKALVDEIAATIMLQEYMERSDK*