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berkeley_reactor_200306_biofilm_scaffold_29408_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(575..994)

Top 3 Functional Annotations

Value Algorithm Source
PilT protein domain protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CE13_SPHS2 similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 139.0
  • Bit_score: 129
  • Evalue 2.50e-27
Uncharacterized protein {ECO:0000313|EMBL:GAO43185.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 137.0
  • Bit_score: 162
  • Evalue 3.80e-37
twitching motility protein PilT similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 139.0
  • Bit_score: 129
  • Evalue 7.10e-28

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 420
ATGGCATTTAGAGTATTCATCGATACCGACATCCTGCTGGACTTCACGTTGAAGCGTGATGCCTATGTCCCTGCCCGAAAATTGATGGAGTGGGCGACTAAAGGAAGAGTGCAGGCCTTTATCACCACCAACACTGTGACTATTACCAGTTACTGGCTGACAAAAGCCTATGGCGCCGCCAAGTCCCGGGAGATCCTCGCCGCTTTGCTGGCGGATATCCAGGTCATCGACATCGGGCACGAGATCACCGTCAATGCACTGCATTCCAGGATACTGAGCACGGTGCAGGCCCTGCAGTATCATGCGGCCCTGCATCACAAACTGGATTATTTCATCACCCGGGACAGGGACCTGGACAAGTCTGCCAGCGCAGTATTGCCCGTTTGCCTGCCCGAAGCATTTATCAATAACAACTGTTAA
PROTEIN sequence
Length: 140
MAFRVFIDTDILLDFTLKRDAYVPARKLMEWATKGRVQAFITTNTVTITSYWLTKAYGAAKSREILAALLADIQVIDIGHEITVNALHSRILSTVQALQYHAALHHKLDYFITRDRDLDKSASAVLPVCLPEAFINNNC*