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berkeley_reactor_200306_biofilm_scaffold_29408_10

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 7854..8840

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJJ5_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 29.1
  • Coverage: 327.0
  • Bit_score: 139
  • Evalue 5.70e-30
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:GAO45559.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 27.7
  • Coverage: 329.0
  • Bit_score: 143
  • Evalue 4.30e-31
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 29.1
  • Coverage: 327.0
  • Bit_score: 139
  • Evalue 1.60e-30

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 987
ATGGTAACGCACTCATTCAAACTGGAAAATTATGAACAATGGTTGGAGGAATTTGCTAATCTATTGCACGTTCCTGTTAAAGACCATGTCCTCACACTTCCTTCCCATATAGGGGAAGGAACCGCCATGGCTCACTCCATGAGTCCTCAACTCTCTTATGCCGTGATGAATTTCACGCTCAAGTCAGACCTGGAAATATATCGTGAAGCGGATGGAGCTAAGGGTTTTTCTTTATCTTTTAACCAGGTAGAGGTATCGGGCAAGGAAGTACGCCTGCACGATGACCAGACGGTCGTAGCCGAAAGGGGCACCCTCAGGAACGATATCTTCCTTTCAGACACCCGTGATCCTTTGCATGTCAAGATCCCCGCGGGCAGCCATGTCAGGAGACTGGTGATCTTTGCCACCCATGACCTGGCGGCCATGTACCTTCCCAAGGACCTGCTGGAAAAGCTGGAAAGCTTTGCAAGGGCCAACAGCCTGTCCGACAATCCTTATTTCGTGAACCTGCCCCACCGGGAAACCCTGAAGGAGCTGTTCGAAATGAAGGAGAACGATCCGCTGAGCCAGATCAGGAGACTTTCCCGGATCATCCATCTCGTGGAAAAATTCCTGCATTCCTTCCTGCGCCAGGAGCAAGCCTCCCTACCCAGGACGATCAAGAAGAACGACCTGCAAAGCATGCAGCACATCGAGCAGATCCTCAGCAGCCGGCTGGAAGGCTTCCCTTCGCTGGAATCCCTGGCGCACGAAGTGTTCATGAGCACCAGCAAGCTGAAAAATCTATTCAAACAGATCTATGGTTATACGCTGTATGACTATTACAACAAGAACAGGTTACAGCGGGCGAAAGAGATGCTGATCACCGGGCAATGCAGTATCAAACAGGCCGGTAGCGAGATCGGCTTCTCCAACCTCAGCCATTTTGCCAAGGCCTTCAGAAAGGAGTTTGGCATTCTTCCAAGAGACCTCGTAAAGCACAAATAG
PROTEIN sequence
Length: 329
MVTHSFKLENYEQWLEEFANLLHVPVKDHVLTLPSHIGEGTAMAHSMSPQLSYAVMNFTLKSDLEIYREADGAKGFSLSFNQVEVSGKEVRLHDDQTVVAERGTLRNDIFLSDTRDPLHVKIPAGSHVRRLVIFATHDLAAMYLPKDLLEKLESFARANSLSDNPYFVNLPHRETLKELFEMKENDPLSQIRRLSRIIHLVEKFLHSFLRQEQASLPRTIKKNDLQSMQHIEQILSSRLEGFPSLESLAHEVFMSTSKLKNLFKQIYGYTLYDYYNKNRLQRAKEMLITGQCSIKQAGSEIGFSNLSHFAKAFRKEFGILPRDLVKHK*