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berkeley_reactor_200306_biofilm_scaffold_29408_20

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(20764..21207)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L4W0_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 132.0
  • Bit_score: 104
  • Evalue 5.40e-20
Uncharacterized protein {ECO:0000313|EMBL:KHD04168.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 136.0
  • Bit_score: 132
  • Evalue 3.40e-28
clan AA aspartic protease, AF_0612 family similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 132.0
  • Bit_score: 98
  • Evalue 1.10e-18

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Taxonomy

Candidatus Thiomargarita nelsonii → Thiomargarita → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
ATGGTATATGCAGAGATCGAATTGATCAACTGCAATGACAAGGAGTTCGCAAAACGCCTAATGATCGGCGAAGACGAGATACGTAGCATACGTGTCAGAATGCTGGCAGATAGTGGCGCCTTTATGTTATGCATCAACGAAAATATTCAGTCTTTTCTTCAGCTCCCCTTTATTGGACAGCGCACGCATCAACTGGCCAACGGCGAATTAGCCACCCACAATGTAGTCGGCCCCGTCGAAGTGAAATTCGCCAACCGGCAGACCTCCTGTAATGCATTGGTATTGCCGGAAGACAGCGAGCCATTATTAGGGGCTATCCCGATGGAAGACATGGATGTATTGATCCATCCACTACGGCAGGAATTGATCGCAAATCCGGAACATCCTGAATATGCCGTGTATAAGCTGGCTGGCATCAGGCAACTACGCTCAAAGTACAAATAA
PROTEIN sequence
Length: 148
MVYAEIELINCNDKEFAKRLMIGEDEIRSIRVRMLADSGAFMLCINENIQSFLQLPFIGQRTHQLANGELATHNVVGPVEVKFANRQTSCNALVLPEDSEPLLGAIPMEDMDVLIHPLRQELIANPEHPEYAVYKLAGIRQLRSKYK*