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berkeley_reactor_200306_biofilm_scaffold_29408_23

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(22913..23326)

Top 3 Functional Annotations

Value Algorithm Source
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 137.0
  • Bit_score: 224
  • Evalue 8.00e-56
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035E30F2 similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 137.0
  • Bit_score: 222
  • Evalue 2.20e-55
3-dehydroquinate dehydratase similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 137.0
  • Bit_score: 211
  • Evalue 1.40e-52

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 414
ATGAAGATAGCCATCATCAACGGCCCCAACCTCAATCTCCTGGGAACCCGGGAGCCGGAGGTATACGGCAGCAAGACCTTCGAACAATACTTCGGGGAATTGAAGACGCTGTTCCCGGCCGTTGAGTTCAGCTATTATCAAAGCAATATCGAGGGAGAGCTCATCGATCAGCTCCAGAAGGTGGGCTTTTCCTATGATGGCATTATCTTCAATCCGGGCGGCTATACACATACTTCAGTAGCAATTGGAGATGCCATCGCCGCTATCACTACACCCGTGATAGAAGTGCATATCAGTAATGTGCATGCAAGAGAGGAGTTCCGCCATCTCAGCCATGTTTCGGCCAAGGCCAAAGGGACGATAGCGGGATTGGGATTGAAGGGGTATGAGCTGGCGGCACGCTGGTTTTTGTAG
PROTEIN sequence
Length: 138
MKIAIINGPNLNLLGTREPEVYGSKTFEQYFGELKTLFPAVEFSYYQSNIEGELIDQLQKVGFSYDGIIFNPGGYTHTSVAIGDAIAAITTPVIEVHISNVHAREEFRHLSHVSAKAKGTIAGLGLKGYELAARWFL*