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berkeley_reactor_200306_biofilm_scaffold_29408_24

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(23326..24411)

Top 3 Functional Annotations

Value Algorithm Source
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 359.0
  • Bit_score: 612
  • Evalue 2.70e-172
Carbamoyl-phosphate synthase small chain n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI96_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 359.0
  • Bit_score: 612
  • Evalue 1.90e-172
carbamoyl-phosphate synthase small subunit similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 359.0
  • Bit_score: 612
  • Evalue 5.50e-173

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1086
ATGGCTATACTCCTTCTCGAAGACGGTACTGTTCATTATGGTAAAGCATTTGGCAAACGGGGCACCACCACCGGCGAGATCTGCTTCAACACCGGTATGACAGGTTACCAGGAAGTTTTTACCGATCCCAGCTACTACGGGCAGGTCCTTATCATGAACAGCGTCCATATCGGTAACTACGGCGTGAAGGATGCCGACGTCGAATCCAACAGTGTTAAGATCAGGGGTCTTATCGGCCGGAACCTGGAAGAACAGTTCTCCCGTATCCAGGCCAAGGGTTCCCTGGACGAATACCTCAAGACCAACAATATCGTCTGTATCGAAGGGGTAGACACCCGAGCGCTCGTAGCCCACGTTCGTGTCAAAGGCGCTATGAACTGCGTCATCTCCTCCGAGATCACGGATATCGATCAATTAAAGGCTATCCTCAGCAAAACGCCCTCCATGGACGGCCTCGAGCTGGCCTCCGCTGTCAGCACGGAGAAAACGTATGAAATGGGCGATCCCGGTGCAGATATCCGCATAGCTGTTATGGACTACGGGGTCAAGCAGAACATCCTCCACTGTATGGTGGAAAGGGGCGCTTTTGTAAAGGTATTCCCTGCCAGGACGCCCCTCGAAGAGGTACGTGCCTTCCATCCGCATGGCTATTTCCTCTCCAACGGCCCCGGCGATCCCGCTCCCATGGAATATGCGATCCCCGTCGTAAAAGAGATCCTGAAAGAGAAGAAGCCCTTGTTCGGCATTTGCCTGGGACACCAGCTGCTGGCGCTGGCCAATGATATCCCTACCTTCAAGATGCACCACGGACACCGCGGCCTCAACCATCCGGTGAAGAACCTGGTCACCGGCAGATGTGAGATCACCACCCAGAACCACGGTTTTGGCGTAGATCCCGTGGCAGTGAAGAAAGCCGCCAATATCGAGGTGACCCATGTCAACCTCAATGATGAATCTATTGAGGGCATCCGGTTGAAAGACCGCCCTGCCTTCAGCGTGCAATACCATCCGGAAGCTACACCCGGCCCCCACGACAGCCGTTATCTTTTTGATGACTTTATCGAGCTGATCAAAAAGCACAAATAA
PROTEIN sequence
Length: 362
MAILLLEDGTVHYGKAFGKRGTTTGEICFNTGMTGYQEVFTDPSYYGQVLIMNSVHIGNYGVKDADVESNSVKIRGLIGRNLEEQFSRIQAKGSLDEYLKTNNIVCIEGVDTRALVAHVRVKGAMNCVISSEITDIDQLKAILSKTPSMDGLELASAVSTEKTYEMGDPGADIRIAVMDYGVKQNILHCMVERGAFVKVFPARTPLEEVRAFHPHGYFLSNGPGDPAPMEYAIPVVKEILKEKKPLFGICLGHQLLALANDIPTFKMHHGHRGLNHPVKNLVTGRCEITTQNHGFGVDPVAVKKAANIEVTHVNLNDESIEGIRLKDRPAFSVQYHPEATPGPHDSRYLFDDFIELIKKHK*