ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_29408_28

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(26921..27325)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S11 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIA0_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 134.0
  • Bit_score: 248
  • Evalue 3.60e-63
30S ribosomal protein S11 similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 134.0
  • Bit_score: 248
  • Evalue 1.00e-63
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 134.0
  • Bit_score: 248
  • Evalue 5.00e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 405
ATGGCAAAAGCACAACAACCCAGCGCGAAAGCCGCTGCGAAGAAAAGGATCGTAAAAGTTGATGTCTATGGCGATGCACACATCACAGCCAGCTTCAACAACATCATCATCAGCCTCACCAACAAGAACGGCCAGGTTATCTCCTGGAGCAGCGCCGGTAAAATGGGCTTCAAGGGTTCCAAGAAGAACACCCCTTATGCAGCTCAGATGGCGTCTGCTGATGCAGCCAAGACAGCACTGGATGCTGGTCTGAAGAAGGTAGACGTTTACGTGAAAGGCCCCGGATCAGGCAGGGAAAGCGCCATCCGCTCGCTGTCCAACAACGGCATCGAAGTAGTGATGATCAAGGATGTGACCCCGCTGCCCCACAATGGCTGCCGTCCTCCTAAGAAACGTAGGGTATAG
PROTEIN sequence
Length: 135
MAKAQQPSAKAAAKKRIVKVDVYGDAHITASFNNIIISLTNKNGQVISWSSAGKMGFKGSKKNTPYAAQMASADAAKTALDAGLKKVDVYVKGPGSGRESAIRSLSNNGIEVVMIKDVTPLPHNGCRPPKKRRV*