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berkeley_reactor_200306_biofilm_scaffold_49244_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(5048..6589)

Top 3 Functional Annotations

Value Algorithm Source
DNA recombination protein RmuC n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0PM44_ELIME similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 514.0
  • Bit_score: 482
  • Evalue 3.30e-133
Recombinase RmuC {ECO:0000313|EMBL:KEY18629.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 506.0
  • Bit_score: 490
  • Evalue 2.90e-135
DNA recombination protein RmuC similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 514.0
  • Bit_score: 483
  • Evalue 5.50e-134

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Taxonomy

Chryseobacterium antarcticum → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1542
ATGGAACTGGCAACATTAATTATAGGCATTATCGCCGGCTGCCTGCTCGGCTGGCTGCTGGCAAAAGCGGCACTCTCTAAAAAAGAGAAGCTGGAGAAAGAGGCGGTAGCCCGTCAGCACAACGATCTCCGCGAAGAATATGCCGCCTACAAAGCCAGCTCCGCCACGCAGCTGCAAAATTTAAAGGAAGAATCGCTCCGGCATCAACAGGCGGTAGCAGGCATAGAAACGACATTGGGCGTGAAGCTCACCGAACTGGCTCAGGTACAGGCAGCGCTGGCCACGGCAACCGCAGAAAAAAATGCCGGCGCCAGGAACCTCATCGACAAAAACAATGAGCTCGTCCGGCTGAAAGAGGAACAGGCATCGGACCGGCAACATCTGCAGCGGACAGAACAGCAGCTGGCCCGGGCTGAGGCTGAGAAAAGGTCGCTCGAAGAGAAAGTCTCCACCCAGGCACAGGAAATGGAAAAACTGAACCAAAGGTTCCTGACCGAATTCGAGAACGTCGCCAATAAGATCCTGGAAAACAAAACTGATAAATTTACCCAGCTGAACAAGACCAACCTGACTGCGATCCTGGAACCATTGGGCAAGACCATAACGGAATTTAAGGAGCAGGTAAGTACCGTGTATGATAAAGAGTCAAAGGAGCGATTTTCCCTGGGCGAAAAAGTAAAGGCGCTGGCCGAATTGAATCAACAGCTTAGCCAGGATGCCAAAAACCTCACCAAAGCATTGAAATCCGAGTCAAAGACCCAAGGCCGCTGGGGCGAGGTCATACTCGAATCCATTCTTGAAAAATCAGGTCTGCGGAAAGGGGAAGAATACTTTATGGAGCATCAGCTGTATGATGTGGACGGTAAAGCTCTGCGTAACGAAGCCAGGGGGACAAAAATGCGGCCTGACGCCGTGGTAAAATACCCGGATAACAGGCATGTCATCATCGACGCGAAAGTATCGCTGAATGCATTTGTCAGGGCCACGGAGGAGACAGATGCCATATTGCAACAGGCAGAGCTGATGACCCATATTCAATCTGTGAAGGGGCATATCCAGGAGCTCGGCGACAGGGCTTACGACGACTATGATAAAACCCTCGACTTTGTCATGATGTTTATCCCGAGTGAAGCGGCCTATATCTCGGCCCTGCAGGCTGATCCGGATCTCTGGAACTTCGCCTATGCAAAGCGGATCCTGCTGATCAGTCCGAGCAACCTCATCATTTCCTTAAAATTGATCGTCGATCTGTGGAAAAGAGAGTACCAGAATCAAAACGCCCAGGCTATAGCAGAACGGGGAAGCAAGCTATATGACAAATTCGTCGGGTTCGTGGCCAATCTTCAAGGGGTTGGAAATGCCCTGGAGTCCGCTAAATCCTCTTACGATGACGCGTATAAACAGCTTAGCACAGGCAGGGATAATCTTGTAGCGCAGGCCACCAAATTGAAGGAGCTGGGAGTCAAGGCAAAAAATGATCTTCCGGCTTCGTTGGTCAGCACGGCGGCGCCCTCTGATGATTCGTCCTATCCCCATCCCTGA
PROTEIN sequence
Length: 514
MELATLIIGIIAGCLLGWLLAKAALSKKEKLEKEAVARQHNDLREEYAAYKASSATQLQNLKEESLRHQQAVAGIETTLGVKLTELAQVQAALATATAEKNAGARNLIDKNNELVRLKEEQASDRQHLQRTEQQLARAEAEKRSLEEKVSTQAQEMEKLNQRFLTEFENVANKILENKTDKFTQLNKTNLTAILEPLGKTITEFKEQVSTVYDKESKERFSLGEKVKALAELNQQLSQDAKNLTKALKSESKTQGRWGEVILESILEKSGLRKGEEYFMEHQLYDVDGKALRNEARGTKMRPDAVVKYPDNRHVIIDAKVSLNAFVRATEETDAILQQAELMTHIQSVKGHIQELGDRAYDDYDKTLDFVMMFIPSEAAYISALQADPDLWNFAYAKRILLISPSNLIISLKLIVDLWKREYQNQNAQAIAERGSKLYDKFVGFVANLQGVGNALESAKSSYDDAYKQLSTGRDNLVAQATKLKELGVKAKNDLPASLVSTAAPSDDSSYPHP*