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berkeley_reactor_200306_biofilm_scaffold_49244_16

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 20001..20861

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YGC9_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 288.0
  • Bit_score: 369
  • Evalue 1.70e-99
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EHQ24481.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 288.0
  • Bit_score: 369
  • Evalue 2.40e-99
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 286.0
  • Bit_score: 362
  • Evalue 7.90e-98

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Taxonomy

Mucilaginibacter paludis → Mucilaginibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 861
ATGCGTATGCTGGACAGGCCCGCCCCGCTGCATCCCCTCGTATCGTTGATAGATTACAGTGATGGTCGTGTTGATCTGCTGCGGAGCGGCCAACAGTTGTCTTTGGATTTTTACAAGATCTCCTTTAAATCAAAGTTCAACGGGAAGGTGCGCTACGGTCAGGGATATTATGATTTTGAAGAAGGTGGTCTGGCCTTCCTGGCTCCTCACCAGGTGGTCACCATGTCGGAAATGGCTGAGGTTTATGAAGGTTTTGCGCTCTTCTTTCATCCCGATCTTATCAGGAATTATCCGCTGGGTCACAACATCCGGAACTATGGCTTTTTCTCCTATGCGGTATCGGAAGCCCTGTTCCTGTCGGAAAAGGAGAAGAAGGTAATCCAGCAGTTGTTCATGACCATTCGAATGGAACTCGATCAAAGCATCGATCATTTCAGCCAGGATATCCTGGTGTCGCAAATTGAGCTGTTGCTGAACTACAGCCACCGCTACTATGCCCGGCAATTCATTACCCGTCGCACGGTGAATCATGAAATGGTGGAAAAGCTGGATCTTTTTCTCGACAGACGGCTGGAACAGGCGCAGGCAGCGGGCCTTCCAACTGTACAGGAAGCGGCGGATCATTTGAACGTATCGCCGAGGTATCTCACCGATCTGCTGCGATCCCTTACAGGTCAGGGGACCCAGCAACATATTCATGACAGGGTGATCAGCCGGGCGAAGGATATTTTGACCAATAGCCATGCATCCATAGCGGAGATCGCTTACCAGCTGGGCTTTGAACATCCCCAGTCGTTTGCCAAATTGTTCAGGCAAAAGACCCGGCTGTCGCCCGTGCAATTCAGGCAATCATTTAATTGA
PROTEIN sequence
Length: 287
MRMLDRPAPLHPLVSLIDYSDGRVDLLRSGQQLSLDFYKISFKSKFNGKVRYGQGYYDFEEGGLAFLAPHQVVTMSEMAEVYEGFALFFHPDLIRNYPLGHNIRNYGFFSYAVSEALFLSEKEKKVIQQLFMTIRMELDQSIDHFSQDILVSQIELLLNYSHRYYARQFITRRTVNHEMVEKLDLFLDRRLEQAQAAGLPTVQEAADHLNVSPRYLTDLLRSLTGQGTQQHIHDRVISRAKDILTNSHASIAEIAYQLGFEHPQSFAKLFRQKTRLSPVQFRQSFN*