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berkeley_reactor_200306_biofilm_scaffold_49244_17

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(20850..21620)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IJY8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 255.0
  • Bit_score: 354
  • Evalue 8.90e-95
short-chain dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 255.0
  • Bit_score: 370
  • Evalue 3.40e-100
Short-chain dehydrogenase {ECO:0000313|EMBL:AKD57156.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 255.0
  • Bit_score: 370
  • Evalue 1.70e-99

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Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 771
ATGAAACGCATCTTCATTACAGGTTCCGCCGACGGCCTTGGTAAAATGGCGGCCACCTTACTGCTCCGGCAGGGACACCGGGTGGTACTGCATGCCCGGAACGAACAACGGGCGGCGGACGCCATGAAGGCCAATCCCCGGGCGGAGACGGCGCTTGCGGCAGACCTGGCCAGCATACAGGAGACCATCGACCTGGCGGCCCAGGTCAATAAACTAGGCCGGTTTGACGCCGTCATACACAATGCTGCTGTCGGATACCAGGAGCCCCGCAAGATCATCACCCCCGACGGGCTGCCACATCTTTTTGCCATCAACAGCCTGGCGCCGTATATATTGACCGCACTGATCGAAAGACCGCAAAGACTCATATACCTCAGCTCGGGTCTTCACCGGAGCGGAGACAGCAGCCTGGACGATCTGACTTGGGAGCGCAGGCCATGGAGCGGCTTCCAGGCATATGCGGATTCAAAACTGCATGATGTGATCCTGGCCTTCGCCATAGCGGAGAGATGGAAAGATGTTTACGCCAACGCATTGGAGCCGGGATGGGTAGCCACCAAAATGGGCGGCAGGGGTGCACCCGACAGTCTCGAAGAGGGACCCGTAACCCAGGCCTGGCTGGCGGCCAGCGAGGATCCAGAGGTCCTGCGATCCGGTGGATACTTTTATCATCAAAAGCCCCGTGCGGTGCATCCGGATGCGAAGAAGAAGGCAGTGCAGGATTTGTTCCTGGAGAAATGCAGGGCGCTCAGCGGGATCTCAATTAAATGA
PROTEIN sequence
Length: 257
MKRIFITGSADGLGKMAATLLLRQGHRVVLHARNEQRAADAMKANPRAETALAADLASIQETIDLAAQVNKLGRFDAVIHNAAVGYQEPRKIITPDGLPHLFAINSLAPYILTALIERPQRLIYLSSGLHRSGDSSLDDLTWERRPWSGFQAYADSKLHDVILAFAIAERWKDVYANALEPGWVATKMGGRGAPDSLEEGPVTQAWLAASEDPEVLRSGGYFYHQKPRAVHPDAKKKAVQDLFLEKCRALSGISIK*