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berkeley_reactor_200306_biofilm_scaffold_49244_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(23747..24538)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI000316A9B4 similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 261.0
  • Bit_score: 197
  • Evalue 1.10e-47
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 259.0
  • Bit_score: 191
  • Evalue 2.90e-46
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEV97798.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.3
  • Coverage: 259.0
  • Bit_score: 191
  • Evalue 1.40e-45

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 792
ATGAAGGTCCAGATATTCACACCTTCTCCATCCATCGCCAGCTACGTCAGCCATATCGTAGTGCTGGAAAATAACAGCATGTTCTTCGAAGCCGTTCTACCCCTTATCGCCAACGGGTTTCCCAGCATCGTTTTCCAACTGACCGACCCTGCGCGGGTCCTGCAGTGCGACAAGCGCAGCGATAACCTGGTGCTGTACGGACAGAACATACGACCCATCCAGCTATACACGGTCGGCCAGATCACGGTGATAGCCTTTTTCCTGCATCCTTATATGTTACAGCCATTAGTCGGCTATAAGGCGGCGGAGTTCACAGACCAGGTGGTGGATCTATCCCTCACGGAGCCGGCGCGTTCGCTCAGCCTCAAAGAGCAGCTGTTGAACGCGGTTACGCTGTCTGAGCGGCTGCAATTACTGACCACCTATATCCTCAAGCTGGCTGCCCGCACAAAGACCGATGCGGACGAACGTATCAGCTTCGCCACCGCCCGCATCCAACGGGCAAAAGGAGCTTCCCTCCTGATGGATATTCAGCAGGAGCTGTATGTGACGGAACGGACCCTGCAGCGCCTGTTCCTGCAGCATGTGGGCCTTACCCCAAAACAATACAGCAGGACCTGCCAGTTCCAGGCCGCCCTGCAACAGCTGACGAGGAATAATTTTACGGATATGGCGGGAGTGGCGTTTGATAATGGGTACGCCGACCAGAGCCACCTGATACGGGCGTTCAGGGATTTCACGAATTATACGCCGCTGGAATACCTGGAGGCAGGAAAAAAGTTCCCGGGATAG
PROTEIN sequence
Length: 264
MKVQIFTPSPSIASYVSHIVVLENNSMFFEAVLPLIANGFPSIVFQLTDPARVLQCDKRSDNLVLYGQNIRPIQLYTVGQITVIAFFLHPYMLQPLVGYKAAEFTDQVVDLSLTEPARSLSLKEQLLNAVTLSERLQLLTTYILKLAARTKTDADERISFATARIQRAKGASLLMDIQQELYVTERTLQRLFLQHVGLTPKQYSRTCQFQAALQQLTRNNFTDMAGVAFDNGYADQSHLIRAFRDFTNYTPLEYLEAGKKFPG*