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berkeley_reactor_200306_biofilm_scaffold_113606_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(378..824)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L9 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRF7_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 148.0
  • Bit_score: 227
  • Evalue 5.50e-57
50S ribosomal protein L9 similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 148.0
  • Bit_score: 227
  • Evalue 1.60e-57
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 148.0
  • Bit_score: 227
  • Evalue 7.80e-57

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 447
ATGGAAGTCATTTTAATTCAAGACGTAGACAACCTGGGCGCCGCTCACGAGAAAGTAAGCGTAAAGAATGGTTATGCACGTAACTATCTGATTCCCCGCAAGCTGGCCGTTGAAGCCAACCCTTCTAACCTCAAGCAGCTGGATGAAAGGATCAAGCAGCTGAAGAAGAAAGAGGCGAAGATGATGGCTGAGGTGAACAAGGTCATCGAAGTCCTGAAAGCTTCTCCCCTCAAGATCGGAGCCAAGACAGGTACCAGTGGCAAGATCTTCGGTAGCGTAACCTCCGTACAACTGGCCCGCGCCATCCGCGACCAAAAGGGTTATGACATCGATCGTCGCCGCATCCATATCCAGGATGAAGTAAAGGAACTTGGAACCTACAAGGCCAAGGTCGACTTTGGGAATAGCAATGAAGCTGAGGTCGAATTTGAAGTAACGGCAGAGTAA
PROTEIN sequence
Length: 149
MEVILIQDVDNLGAAHEKVSVKNGYARNYLIPRKLAVEANPSNLKQLDERIKQLKKKEAKMMAEVNKVIEVLKASPLKIGAKTGTSGKIFGSVTSVQLARAIRDQKGYDIDRRRIHIQDEVKELGTYKAKVDFGNSNEAEVEFEVTAE*