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berkeley_reactor_200306_biofilm_scaffold_113606_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(925..1191)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S18 n=1 Tax=Segetibacter koreensis RepID=UPI00036C0A3F similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 88.0
  • Bit_score: 163
  • Evalue 5.80e-38
30S ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 88.0
  • Bit_score: 162
  • Evalue 3.70e-38
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 88.0
  • Bit_score: 162
  • Evalue 1.80e-37

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 267
ATGGCAAAAGCAAACGAGATCAAATATCTCACCGCGATCAAACCTGAGAAGCGCGCGAAAAAATTCTGCCGCTTCAAGAAATATGGTATCAAGTACATCGACTATAAGGACGCTGAGTTCCTGAAGAAGTTCCTGAATGAGCAGGGTAAATTGTTGCCCCGCCGTATCACCGGTAACTCATTGAAATATCAGCGTAAAGTATCCGATGCGGTTAAGAAGGCCCGTCAGATGTCTTTATTGCCTTATGTAACTGACCTTTTAAAGTAA
PROTEIN sequence
Length: 89
MAKANEIKYLTAIKPEKRAKKFCRFKKYGIKYIDYKDAEFLKKFLNEQGKLLPRRITGNSLKYQRKVSDAVKKARQMSLLPYVTDLLK*