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berkeley_reactor_200306_biofilm_scaffold_113606_16

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 13069..13725

Top 3 Functional Annotations

Value Algorithm Source
3-oxoacid CoA-transferase, B subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC4_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 218.0
  • Bit_score: 381
  • Evalue 3.40e-103
Succinyl-CoA:3-ketoacid-CoA transferase {ECO:0000313|EMBL:KIC89386.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 218.0
  • Bit_score: 382
  • Evalue 3.60e-103
3-oxoacid CoA-transferase subunit B similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 218.0
  • Bit_score: 381
  • Evalue 9.60e-104

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Taxonomy

Flavihumibacter sp. ZG627 → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 657
ATGGCTTTGGACAAATTTGGCATTGCCAAACGTATCGCAAAGGAGTTGAGAGATGGCATGTATATCAATTTGGGTATCGGGATCCCAACGCTGGTGGCGAACTATATTCCCAGAGGGATCTCGATTATGCTGCAATCGGAAAACGGGATGCTGGGTATCGGCCCTTATCCGACGGAGGAGGAAGTGGATGCGGACCTGATCAATGCCGGTAAGGAAACGGTGACCATTTTGCCGGGCGGTGCTTTTTTCGACAGCGCGGAAAGTTTTGGCATGATCAGGGCTGGAAAGGTAGATCTGACGGTACTTGGGGCCATGGAAGTTAGCGACAAGGGAGATATAGCCAATTGGAAGATACCCGGAAAAATGGTGAAAGGTATGGGCGGAGCGATGGACCTGGTGGCCAGCGCCCGCAATATCATAGTAGCTATGCAGCATACGAATCCGAAAGGAGAATCCAAGCTTTTACCAGGCTGTACGCTGCCATTAACGGGTGTAAAATGTGTCAGGAAAGTAGTCACGGACCTGGCTGTGCTGGACATTACACCGGAGGGGTTTCGGCTGTTGGAACGGGCGCCGGGCGTATCTGTAGAGGAGATCCGGGAAAAGACCAGGGGTCGGCTGATCATTGATGGAGATATTCCTGAGATGAAATTATAA
PROTEIN sequence
Length: 219
MALDKFGIAKRIAKELRDGMYINLGIGIPTLVANYIPRGISIMLQSENGMLGIGPYPTEEEVDADLINAGKETVTILPGGAFFDSAESFGMIRAGKVDLTVLGAMEVSDKGDIANWKIPGKMVKGMGGAMDLVASARNIIVAMQHTNPKGESKLLPGCTLPLTGVKCVRKVVTDLAVLDITPEGFRLLERAPGVSVEEIREKTRGRLIIDGDIPEMKL*